Nestor notabilis (Kea): 104399212
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Entry
104399212 CDS
T08494
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104399212 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnt03041
]
104399212 (PRPF8)
Spliceosome [BR:
nnt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104399212 (PRPF8)
Complex C
U5 SnRNP specific factors
104399212 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104399212
NCBI-ProteinID:
XP_010015712
LinkDB
All DBs
Position
Unknown
AA seq
2286 aa
AA seq
DB search
KFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP
WEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPF
DDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQ
FTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQ
DEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPA
FYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPR
PFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKK
RYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKT
LTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLT
GMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLE
RWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTI
LQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDK
TVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPP
LSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQR
AFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPP
LLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYM
TAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPN
DFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYN
NKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNM
CGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILM
ASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPS
RFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLY
RYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHT
LAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTL
FKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYV
GFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETV
QKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWG
DYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQA
MAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVT
IHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALI
RSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKA
TEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWP
TLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEI
EKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNH
IYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVP
QWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGE
KTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLG
FFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSAD
REDLYA
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
aagttcgggttcgtggacgcgcagaaggaggacatgccccccgagcacgtccgcaagatc
atccgcgaccacggcgacatgaccaacaggaagttccgccacgacaagcgcgtctacctg
ggtgctctgaagtacatgcctcatgctgtgctgaagctcctggagaacatgcccatgccc
tgggagcaaatccgagatgttccggtcctgtatcatatcacaggcgccatctcttttgtg
aatgagatcccctgggtcatagagccggtgtacattgctcagtgggggtctatgtggatt
atgatgaggagagagaagagagataggcgtcacttcaagaggatgaggttccccccgttt
gatgatgaagaaccccctctggattatgctgataacatcctggatgtggagcccctggaa
gccattcagcttgagctggatccagaagaggatgcccctgtgctggactggttctatgac
caccagccactgaaagacaacagaaagtatgtgaatggttctacataccagcgctggcag
ttcactctcccaatgatgtccacactgtaccgtttggccaaccagctgctcactgacctt
gtggatgacaactacttctatttgtttgacctgaaagctttcttcacctccaaggcactg
aacatggctattcctggaggtcccaagtttgagcctcttgttagagacatcaatcttcag
gatgaagactggaatgaatttaatgacatcaacaaaattatcatcaggcagccgatcagg
acagagtacaaaatagctttcccatacctgtacaataacctgccacaccatgtccacctg
acctggtatcatactccaaacgttgttttcattaaaacagaagatcctgatctcccagct
ttttactttgatccactgatcaaccccatttcacacagacattctgtcaagagtcaggag
ccgttacctgatgatgatgaagagtttgagttgccagagtttgtggaacctttcctgaag
gataccccactctacacagataacacagccaatggcattgccctgctgtgggcaccaagg
cccttcaacttgaggtctgggaggacccgcagagctcttgatatcccgctggtcaagaac
tggtaccgtgagcactgcccagcaggccagccagtgaaagtgcgagtctcctatcaaaag
ctactgaaatactatgttctgaatgctctcaagcacagacctcccaaggctcagaagaag
aggtacctgttccgctccttcaaggctacgaagtttttccagtccacgaagctggactgg
gtggaagtggggctgcaggtgtgtcgccagggctacaacatgctgaacttgctgatccac
agaaagaacctcaactaccttcacttggattacaacttcaacctgaagcccgtgaagacc
ctcaccactaaggaaaggaagaagtctcgttttggtaatgctttccacctgtgcagagag
gttctgcggctgactaagctggtggtggacagccacgtccagtacagacttggcaatgtg
gatgcatttcagttggcagatggtttgcagtacatctttgcccacgtgggtcagctaaca
ggaatgtaccgatacaagtacaaactgatgaggcagattcgtatgtgcaaggacctgaaa
catctcatctactacaggtttaacacagggccagtgggcaaaggtcctggctgtggcttc
tgggctccaggctggagagtgtggctgttcttcatgaggggcatcacgccactgctggaa
cgctggctggggaatctgctggccaggcagtttgaaggccgtcattccaagggtgtagca
aagactgtcacaaagcagcgtgtggaatctcactttgacctggagctgagggcagctgtt
atgcatgacattctggacatgatgccagaaggaatcaagcagaacaaagccagaaccatc
ctgcagcatctgagcgaggcttggcggtgctggaaggccaatatcccctggaaggtgcca
gggctgcctactcctattgagaacatgatcctgaggtacgtgaaggcaaaagctgactgg
tggacaaacacagctcactacaacagggagcggattcgtcggggtgccactgtagacaaa
actgtgtgtaagaagaacctgggcagactgaccagactctacttgaaagctgagcaggaa
cggcagcacaattacttgaaggatgggccttacatcactgcagaagaggctgttgctgtg
tacacaaccacagtgcactggctggaaagcaggaggttctcacccattcctttccctccg
ctgtcctacaagcatgacaccaagttgctcatattagccctggagaggctgaaggaagct
tacagtgtgaaatctcgcctgaaccagtcacagagggaggagttgggcttgattgaacag
gcttatgataatcctcatgaagctctgtccagaatcaaacgacaccttttaacccagaga
gccttcaaggaagtgggtattgagttcatggatctctacagccacttagttcctgtttat
gatgttgagcccttggagaagatcacagatgcttacctggatcagtacttgtggtatgaa
gctgataagcgaaggctctttcctccatggatcaaacctgctgacactgaacctcccccc
ctgttggtgtacaagtggtgccaaggcatcaataatctgcaggatgtttgggaaacaagt
gaaggtgaatgcaacgtgatgctggagtcccgatttgagaagatgtatgagaagattgac
ctgacgttgctcaacaggctgctgcgtcttattgttgatcacaacattgctgactacatg
acagccaagaacaacgtggtgatcaactacaaggacatgaatcacacaaactcctatggc
attatccgtgggctgcagtttgcttccttcattgtccagtattatgggcttgtgatggac
ctgctggtgctgggtctgcaccgtgccagtgaaatggctgggcccccccagatgccaaat
gacttcctcagcttccaagacatcgccactgaggtggcccatcccattcgcctcttctgc
agatacattgaccgtattcacatcttcttcaggtttacagcagatgaggcaagagacttg
attcagcggtacctgacagagcatccagatcccaacaacgagaacattgtaggctacaac
aacaagaagtgctggccccgggatgctcggatgcgcctcatgaaacatgatgtgaaccta
ggtcgtgctgtattctgggatatcaagaatcgtttgccacgctcggtcaccacagtgcag
tgggagaacagcttcgtatccgtttacagcaaggataaccccaatttgctgttcaacatg
tgtggcttcgagtgccgcatcctgcccaagtgccgcaccagctacgaggagttcacccac
aaggatggtgtctggaacctgcagaatgaggtcaccaaggagcgcacagctcagtgcttc
ctgcgtgtggatgatgagtctatgcagagattccacaacagagtaaggcagatcctcatg
gcatctggctccacaaccttcactaagattgtcaataaatggaatacagccctgattggc
ctgatgacttatttccgggaagctgttgtaaatacccaggaattgcttgatttgctggtg
aagtgtgagaataaaatccagactcgcatcaaaattggtctgaattccaaaatgcccagt
cgtttcccaccagtggtgttttacacccctaaagagctgggggggcttggcatgctctcc
atgggccacgttctcatcccccagtctgacctgaggtggtccaagcagacagatgttggc
atcactcacttccgctcaggaatgagtcatgaggaggaccagctcatcccaaatctgtat
cgttacatccagccatgggaaagtgaattcatcgactctcagagagtatgggcagaatat
gccctgaagagacaagaggctatagcccagaacaggcgtctgacgctagaggatctggag
gactcatgggacaggggaattcctcgtatcaacacccttttccagaaggaccggcacacc
cttgcttatgataaaggatggagagtcaggactgacttcaaacagtatcaggtcctgaaa
cagaacccgttctggtggacacatcagcgccacgacggcaaactctggaacctgaacaac
taccgcacagacatgatccaggcacttggtggagtggaaggaatcctggagcacactctc
ttcaagggcacttacttccctacatgggagggtctcttctgggagaaggccagtggcttt
gaggagtccatgaagtggaagaagctgacaaatgcccagaggtcgggtttgaaccaaatt
ccaaacagaagattcaccctgtggtggtctcctaccattaacagagccaatgtgtatgtc
gggtttcaggtgcagctggatttgacaggaatcttcatgcacggcaagatccccacgctg
aagatttctctcattcagattttccgagctcacttgtggcaaaagatccacgagagcatc
gtgatggatttgtgtcaggtgtttgatcaagagctggatgctctggagatagagacagta
cagaaagagacaatccaccccaggaagtcatacaagatgaattcctcatgtgcagatatc
cttctctttgcttcctataagtggaatgtgtcacgtccatcattgcttgcagattccaaa
gatgtgatggacagcaccaccactcagaagtactggatcgatatccagctgcgctgggga
gattacgattcccatgatatcgagcgctacgcaagagccaagttcctggactacactaca
gacaacatgagtatctacccatcccctactggtgtgctcattgccattgatctggcctat
aacttgcacagtgcttatgggaactggttccctgggagcaaacctctgatccagcaggct
atggccaaaatcatgaaagcaaatcctgccctgtatgtgctgagagaacgaatccgcaag
gggctgcagctgtactcgtccgagcccacagagccatacctctcctcccagaactatgga
gagctcttctccaaccagatcatctggtttgtggatgacaccaatgtgtacagagtgacc
atccacaagacttttgaagggaatttgaccacaaaacccatcaatggagccattttcatc
ttcaatcccagaactggacagctcttcctgaagatcatccatacttctgtgtgggcagga
cagaaacgtctaggacagctggccaagtggaagactgctgaagaagtggctgccttgatt
cgatcgctgcctgtggaggagcagcctaagcagatcatagtgacacggaagggcatgttg
gacccgcttgaggtgcacttgctggatttccccaacatcgtgatcaaaggctcagagttg
cagctgcccttccaggcctgtctgaaagtggaaaagtttggagatctcatcctgaaggct
actgaaccccagatggttctcttcaatctctatgatgactggctgaaaaccatctcttcc
tacacggcattctctcgtctgattctgattctccgggcgcttcatgtgaataacgatcga
gccaaagttattctgaaaccagacaagacaaccataacagagcctcaccacatctggcca
accctgacagatgaggagtggatcaaggtggaggtgcagctgaaggatctcatccttgct
gactatggcaagaagaacaatgtgaacgtcgcatccctgacacagtcagagatccgagac
atcatcctgggcatggagatctctgccccctcgcagcagaggcagcagattgcagaaatt
gagaagcaaaccaaggagcagtcacagctcacggccacccagacccgcaccgtgaacaaa
cacggggatgaaatcatcacctccaccaccagcaactatgagacccagactttctcctcc
aagaccgagtggcgggtcagagccatttcggctgccaacctccacctgcgaacaaaccac
atctatgtttcatcagatgatatcaaggaaacgggctacacgtacatcctgcccaagaat
gtgttgaagaaattcatctgcatctcagatctgagggcccagattgcaggttacctgtat
ggagtgagccctcctgataacccccaggtgaaggagatccggtgcattgtgatggtgccc
cagtggggcacacaccagaccgtgcacctcccagggcagctgccacagcatgagtatctc
aaggaaatggaacctctggggtggattcacacccaaccaaacgagtcccctcagctctcc
ccgcaggatgtcaccacccatgccaaagtcatggctgacaacccctcctgggatggggag
aagaccatcatcatcacctgcagttttacaccaggctcctgcacgctgacagcctacaaa
ctgaccccgagtggctacgagtggggcaggcagaacacggacaaggggaacaaccccaag
ggctacctcccatcccattacgagcgggtgcagatgctgctctccgatcgcttcctcggc
ttcttcatggtcccagcacaggggtcctggaactacaacttcatgggtgtccgccacgac
cccaacatgaagtacgagctgcagctcgccaaccccaaggagttctaccacgaggtccat
cgtccttcccacttcctcaacttcgccctgctgcaggagggggaggtctattccgccgac
cgggaggacctctacgcctag
DBGET
integrated database retrieval system
