Nestor notabilis (Kea): 104399360
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Entry
104399360 CDS
T08494
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104399360 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104399360 (NUP188)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104399360 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
104399360
NCBI-ProteinID:
XP_010018408
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
SSRQLWRVLLGRSSLREPAQIESELNNHLQRLSEGLSYYKPPSTTSAEKVKADKSVDAPL
KELGLRASKFLGLDEEQSVRLLQCYLQEDYRGTRDSLPTVSQDERQSQALMLKLADYYYD
ERICILRCVLQLLTYFQDERHPYMAQYFQCVEKLDKELVPNYWKQFEALYKAEAPTWETH
GNLMTERQVSRWFVQCLREQAMLLEVIFLYHAYFEMSPDDLLAFAKKFKEQGFGTRQTNR
HLVDESMDHLVDRIGYFSALILVEGMEIDSLHKRALDGRTDRHKLANKCIHQEMDSQLLQ
LGDVSHHAPVLLAWALLRHTLNPEESTNVIRRMGSTAIQLNVFQYLTKLLRSLNSGGKNC
ATSTACLCIYGLISFVLTSLELHTLGNQQDIIDVACEVLTVSSIPQLFWKTEPTAGLGII
LDSVCGMFPNQLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKPPDVISHEDGT
LWRRQTPKLLYPLGLGQTNLRIPQGTVGQVVLDDRAYVVRWEYSYSSWTLFTCEIEMLLH
VVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLTTVISPPVDVI
ASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHIISAEGMNAGGYGNLLMSIE
QPQGEYNVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKWRYNSHGVREK
IGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIMGIGVDTIDMV
MTSQCNSDESQGHGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQHGAHGNNLIA
VLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLIHLESKMEDMR
IKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVLQLIDTKQQER
YWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPPPSESSELSVL
DTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLAEHVAETEGSS
CAFMTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTRVLLLVPMSVSCL
QLGSMLCTLLLILLKQWKGELGSVDKIINSLTQILEGVLQADQQMMEKTKAKVFSALITV
LQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDAADDKDSMETDDSSRL
KHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQVTRKVPVLPTIFAALEISLRVKQNLHFT
EASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGSIQTSASSRKSLDAPSW
PGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSLACLEEADHTV
GFILQLSNFTKEWHFHLPQLMKDMQVNLCYLCQACTSLLHSRKMLQHYLQTKNGDSLPAS
VTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKCLAALRHFTPDVCQILLDQ
SLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKEPFPQAAGLNM
QEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSELSTLLSSLSR
YFRRGGPSSPASGVLPSPQGKASSKLGPEGQEPLIQLVQAFVRHVQR
NT seq
5185 nt
NT seq
+upstream
nt +downstream
nt
gagcagcagacaattatggagagttcttctgggcagatcatctttaagagaaccagcaca
gattgagtcagagttgaacaatcacttgcagagattgtcagagggactttcatactataa
gcctccaagtacgacttcagcagaaaaagtaaaagctgataaaagtgtagatgctccact
gaaagagctgggcctgagggccagcaagtttttgggtctggatgaagagcagagcgtgcg
tttgttacagtgttatcttcaagaggattacagaggaacaagggactccctaccgacagt
ttctcaggatgaaaggcagagtcaggctctgatgctgaagcttgctgactattactatga
tgagaggatctgcattctgcgctgtgtcctccaactactcacttattttcaggatgagag
gcacccttatatggctcaatacttccagtgtgttgaaaagttggacaaggaactagttcc
taattactggaaacagtttgaagcactatacaaagcagaagctcctacatgggaaacaca
tggaaatcttatgacagaacgtcaggtttcccgttggtttgtgcaatgcctccgtgaaca
ggccatgctcctggaagtcatcttcctctaccatgcatactttgaaatgtcacctgatga
tctgctggcatttgcaaagaagttcaaagaacagggatttggcactagacagaccaacag
acatttggtagatgagagcatggatcacctggtggatcggattggctactttagtgctct
tattctggtggaaggcatggaaatcgactccctccataagcgtgctttggatggcaggac
tgacaggcacaaattagccaataagtgcatccaccaggagatggacagtcagctgctgca
gttaggggatgtctcacatcatgctccagtgcttttggcctgggctctgctccgtcacac
tctaaacccagaggagtcaacaaatgttatcagaagaatgggcagcactgccatccaact
gaatgttttccagtatctgacaaagctgctgcgatcactgaacagtggggggaagaattg
tgctaccagcactgcttgtttgtgtatttatggacttatttcctttgtcctgacatcact
ggaattgcatacgttgggcaatcagcaggatataattgacgttgcatgtgaagttctgac
agttagcagcattcctcagctattctggaagacggaacctactgcaggtctggggattat
cctggacagtgtgtgcggaatgttccccaatcagcttactcctctccttcagctgctgca
agcccttgtgtctgataaatctactgcaaaaaaggtatacagtttcctggataaaatgtc
cttctatattgaactgtacaagcataaacctcctgatgtgatctctcatgaagatggcac
gctttggcgcagacagactccaaagctcctctatcctcttggactaggtcaaaccaacct
gcggatacctcagggaacagtgggccaagtggtgctggatgatcgggcttatgtagtacg
atgggagtattcctacagcagctggacactgtttacttgtgagattgagatgctgcttca
cgttgtatcgacagcagatgtgattcagcattgccagagggtcaagccaataattgacct
ggttcataaagtcatcagcactgatgtatcgatagcagattgccttctgcccatcacatc
acgaatctacatgctcctgcagaggctaacaactgtaatctctccccctgtggatgttat
tgcttcttgtgtcaattgtttgacagtactggctgctcggatgccagccaaggtttggac
tgaccttcaccacacgggtttcttaccatttgttgccaatccagtgtccagcatgaatca
cattattagtgcagagggaatgaatgctggaggctatggaaacctactgatgagcataga
acagcctcagggcgagtacaatgttaccatctccttcctgaacctgataacaacgcttgt
caggggacaacttggtagcacccagagccaaggacttgtgccctgcattgtgtttgtcct
gaaggagatgttaccaaactaccacaagtggcgttacaactctcatggagtgagagagaa
aattgggtgcctgattctgcagctgattcatgctatactgaatttatgccctgaaatgga
tcctcgcagtagcaatgcccccagccttcagtccctgtgcatcttcagcctggccaacac
tgaagcagggcaagctgtcattaacatcatgggaattggtgtggatactattgatatggt
aatgacctcccagtgtaacagtgatgagtcacaaggccatggtcagctgctgatccagac
agttaaactggcgttctcagttaccaataatgtcatcaggttgaaacccccctctagcgt
ggtgtctccattagaacaggcacttactcaacatggtgctcatggaaacaatcttattgc
agtcttggccaaatatatctaccacaggcacgaccctgctcttccacgcctggccatcca
gctgctcaaacgactggctacggttgctcccatgtctgtttatgcctgccttggtagtga
tgctgctgccatccgcgatgccttcctcatccatctagagagcaagatggaggacatgcg
tattaaggtcatgatactggagttcctcacagttgcagtggagacacaacctgggctcat
cgagctgttcctgaacttggaagtgaaggatggcagtgatgggtcaaaggaattcagctt
aggggagtggagttgcctccaagtagtcttacagctgatagataccaaacaacaggagag
gtactggtgccctcccctcttgcaccgtgctgccattgccttcctgcatgctctgtggca
ggaccgtcgcgatagtgccatgctagtgctgcggacaaagccaaagttttgggaaaattt
aactaatcccctctttggaacccttcctccgccttcagaatcatcagagctcagcgtctt
ggatacctgtgccttaatcatgaaaatcatctgtttggagatctactatgttgtcaaggg
ctcactggatcagtccctgaaagacacgctgaagaacttctccaccaaaaagcgctttgc
ctactggtcagaatacgtgaagttactggcagagcatgtggcagagacagagggcagcag
ctgtgccttcatgacagagtatcagatgctcatctcagcctggcggatgctgctcataat
ctctacgagccacgctgatataatgcacctgactgattctgcagttcatcagcaattgtt
tctggatgtgctcaatggcaccagagttttgctcctagttcccatgtcagtatcctgtct
gcagctggggtctatgctatgtacccttcttctgatcctgctcaaacagtggaagggtga
gttggggtctgtggataaaatcataaactccttgacgcagattttggagggagtactcca
ggcagatcagcagatgatggagaaaaccaaagccaaagtgttctcagctcttatcactgt
tctgcaaatgaaggagatgaaagtgaatgagatcccacagtactcccagctggtgctgag
cgtgtgtgaaacactccaagatgaggtcattgcgctctttgatcagactcgacacagcct
gaccttgggagatgctgcagatgacaaggacagcatggaaacagatgactcctctcgact
gaaacacaaagaccagcgagatggggtgtgtgttctgggtctgcatctggctaaagagct
ctgtgaagttgatgaagatggagactactggctacaggttactaggaaagtccctgtgct
tcctactatctttgctgcattggagatcagcctgagagttaagcaaaacctgcacttcac
agaggcctcattacatttactgctgaccttagcaaggactcaacagggagcagcagctgt
ggctggagctggtgtcacacagagtgtctgcctgcccctccttagtgtgtaccagctcag
cactaatggatccattcagacatctgcttcatcacggaagtctctggatgccccctcctg
gcctggggtctatcgtctctccatgtcactgatggaacgtctgcttaaaacactcagata
caacttcctgacagaagcactggactttgtcggtgtccatcaagagaggattcttcagtg
cctgaatgcagtacggacagtacagagcttggcctgtctggaagaggctgatcacactgt
tggcttcattcttcagctctcaaatttcacaaaggagtggcatttccacctgccacagct
tatgaaggacatgcaggtgaatctgtgttacctgtgtcaagcctgtacctccctcctgca
cagccgcaaaatgctccagcactacctgcagacaaaaaatggtgattctcttccagcaag
tgtgaccccccgagtgcagcgtaacccgcaagcctcctccaaacatcccagccctgagtc
agaggcagcagagcagaaagccctgcttacagtgcagtacagcctcttgaagatcctcag
caagtgtcttgctgccctgcgccatttcacccccgacgtctgccagatcctccttgatca
gtcgctggaccttgctgagtacaacgtgctcttcgttttgagtttcaccacaccagcctt
tgattcagatgttgcaccttcctttgggaccctccttgccacagtcaacgtggcccttaa
catgctgggagagctggataagaagaaggaacctttccctcaggctgcagggctgaatat
gcaagagggaaccaaaaccctcaagtctctgctcatgtttacaatggagaactgtttcta
cctgctcatctcccaggccgttcggtacttgagagacccagcggtgcatccccgtgacaa
gcagcgcatgaaacaggagctcagctctgagctgagtactctgctctccagcctgtcccg
ttacttccgtcggggtggtccctcttcacctgccagcggggtcctaccctctccccaagg
gaaagcctcctccaagctgggtcctgaggggcaggagcctttgattcagctcgtgcaggc
cttcgtccggcatgtgcagagatag
DBGET
integrated database retrieval system
