Nestor notabilis (Kea): 104399417
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Entry
104399417 CDS
T08494
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt04622
RIG-I-like receptor signaling pathway
nnt05164
Influenza A
nnt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104399417 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104399417 (IFIH1)
05168 Herpes simplex virus 1 infection
104399417 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nnt04054
]
104399417 (IFIH1)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104399417 (IFIH1)
Pattern recognition receptors [BR:
nnt04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104399417 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
ResIII
DEAD
Helicase_C
CARD_2
SWI2_SNF2
CARD
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104399417
NCBI-ProteinID:
XP_010010594
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MRTVQVAEKCLEMGIFQDEDLDGIHTVTDNRGNREGARELLSRLMQKKDWFSRFLIALRE
TQHGGLADDLSGNIGGTEDKQNGMKNSMNKEREVKSQPGYAIVEDLKQQENMNDSFSSEN
NLLETSIGKNSVVSESDVSIGVGCISNFNENLGQSCTTSDSDEEESRASPEPDLVLRDYQ
MEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLVNKVPLVEQH
LRKEFNPFLKRWYHVIGLSGDSQLKILFPEVVRRNDVIICTAQILENSLLNADKEDEEGV
NLSDFSLIIIDECHHTQKEGVYNNIMRCYLKEKEKNRKLAKENKPLIPQPQILGLTASPG
VGGATSYSKAEEHILKICASLDACRIMTVEEHASQLKSQVKEPFKKTVIADDKRRDPFKE
RITEIMTEIQNYCQLHPKSEFGTQPYEQWVIREEKKAAKEEKRKERVCAEHLKKYNDALQ
INDTIRMMDAYNHLNNFYKEEKSRKTVRSDDDDDGEPAVSKQDETDLFLIDLFHAKKKHL
KELARKPEYENEKLIKLRNTLMEEFTKTEAPRGIIFTKTRLSAFALFQWIKDNPKFEEVG
IKAHHFIGAGHNSEMKRMTQNEQREVIDKFRGGNLNLLIATTVAEEGLDIKECNIVIRYG
LVTNEIAMVQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccgtgcaggtggccgagaagtgcctagagatgggcatcttccaggatgaggac
ctggatgggatccatactgttactgacaaccgtgggaacagagaaggtgcaagggaacta
ttgagccgactaatgcagaagaaagattggttctctcgttttttgattgctctgcgtgaa
acccaacatggaggccttgcagatgatttgagtggaaatataggaggaacagaagataaa
caaaatgggatgaagaacagtatgaacaaagaaagagaagttaaaagccaaccaggttat
gccatagtggaggatttgaagcagcaagaaaatatgaatgatagtttcagcagtgagaac
aatttattggaaacatctattggaaagaattctgtagtttcagagtcagatgtctctata
ggagttggatgtatcagtaacttcaatgaaaacttgggtcaaagctgcacaaccagtgat
tcagatgaagaggagagcagagcttcacctgagccagatctggtcctgagagattaccaa
atggaagttgcaaagccagcactgaatggggagaatattataatatgtctccctacaggc
agtggtaaaaccagagtggctgtttacattaccaaagatcatttggataagaagaagaga
gcatcagagcctggaaaagttatagtccttgttaataaggtaccattggtagaacagcat
ttacgaaaggagtttaatccattcctgaagcgttggtatcatgttattggtttaagtggt
gattctcagctgaaaatcttatttcctgaagttgtcagaagaaatgatgtcatcatttgt
acagcacagatccttgaaaattcactgctaaatgcagacaaagaagatgaagaaggtgtc
aacttatcagatttttcactcatcattattgatgagtgtcatcacactcaaaaggaaggt
gtctacaataacataatgcgatgttacttaaaagaaaaagagaagaacaggaagctggca
aaagaaaacaaaccactgatcccacagcctcagattctgggacttacagcctcacctggt
gtaggaggtgcaacttcctactccaaagctgaagaacatattctgaaaatttgtgccagt
cttgatgcatgtagaatcatgactgttgaggagcatgcctcccagctgaagagtcaggtg
aaggaaccttttaagaagactgtgattgcagatgacaaaagaagggatccatttaaagag
agaataactgagatcatgacagagattcaaaactattgccagctccatccaaaatctgag
tttggaactcagccgtatgaacagtgggtgattagagaagagaaaaaagctgcaaaagaa
gaaaaacgcaaggaacgtgtctgtgcagaacacctaaagaaatacaatgatgctctccag
ataaatgataccatccgaatgatggatgcgtacaatcacctgaataacttttataaggag
gagaaaagtaggaagacagtaagaagtgatgatgatgatgatggtgaaccagcagtatca
aaacaggatgaaacagatttatttctaatagatttatttcatgcaaaaaagaaacatctg
aaagagttggctagaaagccagaatatgaaaatgagaagctaataaagttgcgaaacact
ttaatggaggagttcacgaagactgaggcacctagaggaattattttcacaaagacacgg
ctaagtgcctttgctctattccagtggattaaggataaccccaaatttgaagaagtggga
attaaggcccatcattttattggtgctggacataacagtgaaatgaaacgcatgactcag
aatgagcaaagggaagttattgataaattccgaggtggaaatctgaacttacttattgct
actactgtagcggaggaaggcctagacatcaaagagtgtaacattgttattcgctacggc
ctcgtcaccaatgaaattgctatggtgcag
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