Nestor notabilis (Kea): 104399598
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Entry
104399598 CDS
T08494
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnt03009
]
104399598 (DDX55)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104399598 (DDX55)
Ribosome biogenesis [BR:
nnt03009
]
Eukaryotic type
Pre-60S particles
Helicases
104399598 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SHOCT
AAA_22
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
104399598
NCBI-ProteinID:
XP_010016279
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAVIITPTRELAIQIDEVLS
HFTKHFPRFRQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVK
SLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM
PELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKDREENGGKKKFIKNKAWSK
QKAKREKKKKVTAKRKHEEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQN
RLKAGTAAESEG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaggatgttgccgcagaagcggtaacgggcagtggcaaaaccttggcgttt
gtaatccccatactggaaattctgctcagacgggaagaaaaactaaagaaaatgcaggtt
ggggctgtaattatcacaccaacacgagaattagctattcagattgatgaggtcctatca
catttcacaaagcacttccccaggttccgtcagatccttttaattggtggtaggaatccc
atggaagatgttgaaaagtttaaagaacacggtgggaacatcattgtagctaccccaggc
cgcctggaggatctgttcagaagaaaagctgatgggctggatctagcaagttgtgtgaag
tctcttgatgtgttggtactagatgaagcagacagacttctggatatgggctttgaagca
agtttaaatgccattctggactttttgcccaagcagaggcgaacgggtctgttctcagca
actcagactcaagaggtggagaacctggtgagggcaggtctccggaatcctgtccgcatc
tcggtgaaggagaagggagtggcagcaagcaacacacagaagactccaacacgcctggag
aactactacatgatctgcaaagcagatgaaaaatttaatcagttggtgcattttcttcga
cagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcctgtgtggaatactat
gggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcatgggaaaatg
aaacacaaacggaacaagatttttactgagttccggaagctcccaggtggcattttagtt
tgcactgacgtgatggcccgtggcatagacattccagaagtacactgggttttacagtac
gacccacctagcagtgcaagtgccttcgtgcatcggtgtggtcgaacagcgcggatcggc
aacgtcggcagcgcacttgtgtttttgcttcccatggaagaatcttatgttaactttctc
tcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaacgtgttagatctt
cttccaaaactgaagtctatggccctcgctgacagggcagtgtttgagaaggggatgaaa
gcctttgtgtcgtatgtccaggcttatgccaaacatgaatgtaatctcatcttccgaata
aaagatctggattttgcaagtcttgccaaaggttttgcattgttaaaaatgccaaagatg
cctgaactaagaggaaaatgttttccagactttactccagtcactgttaatacagactcc
atttcatttaaagataaaaatagagaaaaacagagacaaaagcaattagaacaacaaaga
aaagacagagaagaaaatggagggaaaaagaaattcataaagaacaaagcctggtcaaag
cagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaagcatgaagagggc
tctgatattgaagatgaggatatggaagagttgctgaatgacacaagactcttgaaaaga
ttaaaaaagggaaaaatcagtgaagaagagtttgaaaagagactaacaggcagccagaat
aggctcaaagcaggaactgctgctgagtctgaaggttga
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