Nestor notabilis (Kea): 104399753
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Entry
104399753 CDS
T08494
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03020
RNA polymerase
nnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104399753 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104399753 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnt03021
]
104399753 (POLR2B)
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104399753 (POLR2B)
Enzymes [BR:
nnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104399753 (POLR2B)
Transcription machinery [BR:
nnt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104399753 (POLR2B)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104399753 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104399753
NCBI-ProteinID:
XP_010009003
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagatgatgatgaaatcacccctgacttgtggcaagaagcgtgctgg
attgttattagctcctattttgatgaaaagggtttagtcaggcaacagctggattctttc
gatgagtttattcagatgtctgtgcagagaattgtggaagatgctccaccaattgattta
caagctgaagcccagcatgccacaggagaagtggaagagccgccccggtatctgttgaag
tttgaacaaatctacctctctaaacctacacattgggaaagagacggagcaccctcacct
atgatgcctaatgaagccaggctgaggaaccttacgtattcagcccccttgtatgtggat
ataactaaaacagttattaaagaaggggaggatcagttacagacacagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacatactgtttgttgaatggcttaacg
gaccgtgatctttgtgaactgaatgaatgcccgcttgatcctggtggatactttatcatt
aatggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtgtatgtg
tttgcaaagaaagattcaaaatatgcctacacaggagagtgtagatcttgtctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgcg
aagaagagtgctattggtcagcgcattgtagcaaccttgccttatatcaaacaagaagtc
cccatcataattgtctttcgtgcactaggctttgtgtctgacagggacatcttagagcac
atcatatatgattttgaagatccagaaatgatggaaatggtcaaaccttctctggatgaa
gcatttgtcattcaagagcaaaatgttgctctaaacttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagagaagagaatcaagtatgctaaagaggtcttgcagaaggaaatg
ctcccacatgttggtgtcagtgacttctgtgaaaccaaaaaggcctattttctaggatac
atggttcatagattgttgctggcagcactgggaagaagagagcttgatgacagagatcat
tatggcaacaaaagactggatcttgctggaccactgttagctttcctattcagaggaatg
ttcaagaatttgctaaaggaagtgagaatatatgcacaaaagttcattgacagagggaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ctggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccgcctgactttcgcatctacactttcccacttgagacgcctgaattct
ccaattggtcgagatggcaaactagcaaagcccagacagctgcacaacacactgtgggga
atggtttgccctgctgagaccccagagggtcatgcagtaggacttgtgaagaacttagcc
ctcatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcagcaatagctgatgctaccaagatc
tttgttaacggctgctgggtaggaatacacaaagatccagagcaactcatgaatacccta
aggaagctccgtcgtcagatggacatcattgtgtcagaggtctcaatgattagagatatt
cgtgagcgagaaatccgcatctacactgatgcaggcagaatttgtcgaccccttttaatt
gtggaaaaacagaaactgctgttgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaactacagttggcaggatcttgtggccagcggtgtagtagagtacattgacaca
ctggaagaagagactgtgatgctggcaatgactccagatgatttacaagagaaaggtgtg
gcatattgttcaacatacacacactgtgagattcacccatctatgatcctgggagtatgt
gcatctattatcccttttcctgatcacaaccagtctcccaggaacacttaccagtctgcc
atgggtaaacaggctatgggagtttacattacaaactttcatgttcgtatggatacactg
gctcatgtattgtactatcctcagaagccccttgtaacgacacgctccatggagtacttg
cgatttagagagttaccagcaggtatcaactcgattgtagccattgcatcatacacaggc
tataaccaggaagactccgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcgtacaaagagcaggagtctaaaaaagggtatgaccaagaggaa
gtttttgagaagcctacacgtgaaacttgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggacgatgtcatcatt
ggcaaaacagtaacgctgccagagaatgaagatgaactggaaagcaccaacaggcgtttc
acaaagagggactgcagcactttcctgagaactagtgagactggcattgtagatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtacgttctgtgaga
atcccacaaattggagataaatttgccagcagacatggtcagaaaggaacctgtggtatc
cagtacaggcaagaggatatgccctttacctgtgaaggcatcacacctgatataattatc
aaccctcatgccatcccttcccgtatgaccattggtcacttgatcgagtgtctccagggg
aaggtgtctgcaaacaagggagagattggcgatgctacacctttcaacgatgctgtcaac
gtgcagaagatttccaatcttttatcagattatggctatcatctaagaggaaacgaggtt
ctctacaatggcttcactggtcgaaaaatcacatcacagatcttcattggtcctacgtat
tatcagcggttgaagcacatggtggatgacaaaatccattctcgtgcaagagggcctatc
cagatacttaacagacagcccatggagggtcgatctcgtgatggtggccttcggtttgga
gaaatggaacgggattgccagattgctcacggagcagcccagttcttgagagaaagattg
tttgaagcctcagacccataccaagtccatgtctgcaatctctgtggcatcatggcgatt
gcaaacacaaggactcacacctacgaatgccggggatgccgtaataaaactcagatatct
ttggttcgaatgccctacgcctgcaaactcctcttccaggaactgatgtctatgagtatc
gcacctcgtatgatgagtgtttag
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integrated database retrieval system
