Nestor notabilis (Kea): 104399785
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Entry
104399785 CDS
T08494
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104399785 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnt03021
]
104399785 (TAF5)
03036 Chromosome and associated proteins [BR:
nnt03036
]
104399785 (TAF5)
Transcription machinery [BR:
nnt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104399785 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104399785 (TAF5)
Chromosome and associated proteins [BR:
nnt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104399785 (TAF5)
STAGA complex
104399785 (TAF5)
TFTC complex
104399785 (TAF5)
SAGA complex
104399785 (TAF5)
SLIK complex
104399785 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
CDK5RAP3
WD40_like
eIF2A
RAB3GAP2_N
VID27
Motif
Other DBs
NCBI-GeneID:
104399785
NCBI-ProteinID:
XP_010022326
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
GGSVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVH
MYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFV
LRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKRE
ANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNR
IPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIV
GGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPV
YGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHD
RVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFT
GHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEIL
ASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFT
RRNLLLAAGAYSSQ
NT seq
1847 nt
NT seq
+upstream
nt +downstream
nt
ttggaggaagtgttgttgtggaagatcagccagatgtgagtgcagtattgtctgcctaca
atcaacagggtgacccgactctgtatgaggaatactacagtggattaaaacacttcattg
agtgttctctggactgtcatcgagcggaattgtctcagctattttatcctctctttgtgc
acatgtacttggaattggtctacaatcaacacgagagtgaagctaagtctttttttgaaa
gatttcatggggatcaggagtgctattaccaggatgacctgcgtgtgttgtccagtttaa
ccaaaaaagaacatatgaaaggtaacgagaccatgctggatttccgaacaagcaagtttg
tgctgcgcatttcccgtgactcttaccaactcttgaagaggcatcttcaggaaaagcaga
acaatcagatctggaacattgttcaggagcatctttacattgatatctttgatggaatgc
ctcgcagtaaacaacagatagatgctatggttggaagcttggctggggaggcaaaacgag
aggctaataaagcaaaggttttctttggcttattgaaagaaccggagtttgatgtgcctt
tggatgatgaagatgaagaaggagaaaatgaggagggaaagccaaagaagaaaaaaccta
aaaaagatagtgtagggtcaaaaagtaaaaaacaggaccctaatgctcctccccaaaaca
gaattcctctgcctgaactgaaagactctgacaagctggataaagtcatgaatatgaagg
aagctgcacggcgtgtgcgtcttggcccagagtgcctgccctccatctgtttctacacat
ttcttaatgcttaccagggtctgactgcagtggatattacagatgattctagcatgattg
ttggaggctttgctgactctactgtcagagtgtggtccgtcactccaaaaaagctgcgta
gtgtgaaaacagcagcagaccttagtctcattgacaaagaatcagacgatgtcttggaga
ggatcatggatgagaaaacagcaagtgagttgaagattttatatggtcacagtggacctg
tctatggcaccagcttcagtcctgataggaactatctcttgtcctgttctgaggatggca
ctgtcagattgtggagtctccaaacattcacatgtctggtgggatataaaggacacaact
acccagtatgggatacacagttctctccttatggttattactttgtgtcagggggacatg
acagagtggctcgtctttgggcaacagatcactaccagcctttacggatatttgctggtc
atcttgctgatgtgacgtgtacccgattccatccaaactccaactatattgccacaggct
cagcagacaggacaatacggctctgggatgttttgaatgggaattgtgtcagaatattca
cgggacataagggaccaattcattcactagcattttctcctaatggacgattcctggcta
ctggagcaacagatggaagagttctgctgtgggatattggacatggcttgatggttggag
aattaaaagggcacaccgacaccgtctacgcgctcagattcagtagagatggagagattt
tagcatcaggttcaatggataatacagttcgcctgtgggatgctgtgaaggcatttgagg
atttagaaaccgatgactttactacagccactggacatataaacttgcctgaaaactcac
aggacttgttactaggtacatacatgaccaaatcaaccccagttatacacctccatttta
cacgcagaaacttgctgctggctgcaggagcctacagttcacagtga
DBGET
integrated database retrieval system
