Nestor notabilis (Kea): 104399786
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Entry
104399786 CDS
T08494
Symbol
PMS2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03430
Mismatch repair
nnt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104399786 (PMS2)
03460 Fanconi anemia pathway
104399786 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104399786 (PMS2)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104399786 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104399786
NCBI-ProteinID:
XP_010016408
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
LEPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDYGAELIEV
SDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKS
AKVGTRLVFDHNGKITQKTPFPRPQGTTVNIQQLFYTLPVRHKEFQRNIKKVSXIRNYYS
KRFYCRHTVLFQXGVRINCTNQVGQGKKNSVVSTTGSPSLKENIGAVFGQKQLQSLIPFV
QLPPNEAVCEEYGINATDMPQNLYSITGFISRCDHGVGRSATDRQFFFINQRPCDPAKVV
KLVNEIYHVYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLMKMF
GSDVNKLNVNQKLLDIAGNLRKTLPEETEKPQVEMLPDSETENPSGEIKRIMTLSRLRES
FSLSQMSESNFRSPKNVKQQYGSPRQMSLDTTWRTMKTQKAILTRQSKSCHKSDSETSTP
SRYLRKLEDNADSGFCSTSESDAGCNTPEAGTCIGNESIINLCEEEFCSSEEQLQNECFR
TVGCSEKSLKCDVQDLGAEHKLNQGIDWTDQNKLSQESGSSSPRIKRFKSGSFRNEVDNF
KAGKCPEVKNTTNYKPTVDVLVEVKKKTVPLEFSMKVLVEKVKKVIEQQQKSTETQKYRR
FKAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKY
NFEMLQQHTVLQGQKLIVPQNLNLTAVNENILIENLEIFRKNGFDFVINENAPVTQRVKL
ISLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEM
RKLITHMGEIEHPWNCPHGRPTMRHIVSLDLISTE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ctcgaacctgccaaagccatcaagcccatcgaccgtaagtccgttcatcggatctgttcg
ggacaggttgtgctcaatcttggtactgccgtgaaggagttggtggaaaacagcctggat
gctggagctaccaacattgatataaagcttaaagattatggagctgaactgatagaggtt
tcagataatggaggtggagtggaagaggaaaactttgaaggcttgactctgaaacattat
acatcaaagatacaagatttttctgacctaatacatgttgaaacatttgggtttcgaggt
gaagctctgagttcactgtgtgcattaagtgatgttaccatttttacatgtcataagtct
gcaaaggttgggactcggttggtatttgatcacaatggtaaaattactcagaaaacacct
tttccacgaccacagggaacaactgtgaacatacagcagttgttttatactctgcctgtg
cggcataaggaattccaaagaaacattaaaaaggtaagttagattagaaattattattcc
aaaagattctattgcaggcatactgtattgtttcaanaaggagtgaggattaactgcaca
aatcaagttggccaagggaaaaaaaactctgtggtgtccactactgggagtcctagttta
aaggaaaacattggagcagtatttgggcaaaagcagttgcagagcctaattccttttgtt
cagctacctcctaatgaagctgtttgtgaagaatatggaatcaacgctactgatatgcca
cagaatctttatagtattacaggcttcatctctcgctgtgatcatggtgttggaaggagt
gcaacagacagacagtttttctttatcaaccaacgtccatgtgatccagcaaaggttgtc
aaacttgtgaatgaaatttatcatgtatataataaacaccagtatccatttgttgtccta
aacatttgtgtagattctgagtgtgttgacatcaatgtaactccagacaaaaggcaaatc
ttacttcaggaggagaagcttttattagcaattctaaaaacttctctgatgaagatgttt
gggagtgatgttaacaaactgaatgtcaatcagaaacttctggacattgcaggcaacttg
aggaaaacacttcctgaagagacagaaaagcctcaggtagaaatgctgcctgactctgaa
actgaaaatccaagtggtgaaataaaaagaataatgactctttctagattaagggagtca
ttctctcttagccaaatgtcagagagtaattttcgaagccctaaaaatgtaaaacagcag
tatggctcccctagacaaatgtcacttgataccacttggagaaccatgaagactcaaaag
gctatcttgactaggcagtccaagagttgccataagagcgactcagagacatcaactcca
agcagatatttgaggaaattggaagataatgcagattctggattttgtagcacttctgag
tcagatgctggatgtaacacaccagaagctgggacctgcatcggtaatgaaagtataatt
aatctttgtgaagaagaattctgtagctcagaagaacaacttcagaatgaatgtttcaga
actgttggatgtagtgagaaatcattgaaatgtgatgttcaggacttgggcgctgaacat
aagttaaatcaagggattgactggactgatcaaaataagttatctcaagaatctggtagt
tcttccccaagaataaaacgttttaaaagtggaagctttagaaatgaagtggacaacttt
aaggcaggcaaatgtcctgaagtgaagaatactacgaactataagccaactgttgatgta
ctggtggaagttaaaaagaaaactgtgccacttgaattctctatgaaggttttagtggaa
aaggtaaaaaaggtaatagagcaacaacagaaaagtacagaaacacaaaagtacagaaga
tttaaagcaaaaattagtcctggagaaaataaagtagcagaagatgaattgagaaaagag
atcagtaaagaaatgtttgcgaaaatggaaattattggtcagttcaatttagggtttatt
atagcaaagttgaattctgatcttttcataattgatcaacatgctactgatgagaagtac
aactttgagatgttacaacaacacactgttcttcaaggtcagaagctgatagtgcctcaa
aatctcaatctaacggctgtaaatgaaaatatactgattgaaaacctggaaatattcaga
aaaaatggttttgattttgtcataaatgaaaatgctcctgtaactcaaagagttaaatta
atatcgttgccaacaagcaaaaactggactttcggtccacaagacatagatgagctgatc
ttcatgttaagtgactgccctggagtcatgtgtaggccttccagggtcaggcagatgttt
gcttctcgagcttgcaggaagtctgtgatgattggaactgcactgaatgtgcaggaaatg
agaaaactgatcacccatatgggtgagattgagcatccctggaactgcccccatggaagg
cctactatgagacacatagtcagtttagacttgatttcaacagaataa
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