Nestor notabilis (Kea): 104400057
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Entry
104400057 CDS
T08494
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03440
Homologous recombination
nnt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104400057 (PALB2)
03460 Fanconi anemia pathway
104400057 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104400057 (PALB2)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104400057 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
104400057 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
104400057
NCBI-ProteinID:
XP_010022830
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
EQTADAFKHVPQFYSHEGGLQDSSQAESIQASQEILCAGISRPTPEEKKPQTSRSLLRLR
RRAKARVSGDRGSVCEVLLSSTGETVTNQVASTGELRSPVFRQSSVSATEETAPRAAGPA
HVQREENGFTPPSAASGATQASVPPGAPELFPHALQGCSSVWQPESQGAVPTSDDPEPAQ
PCSENRDSALGDVSGDGGKESPSIIRQTSGESTCEDQGELCRLLDLMSENEVLSPDGNKT
ETNETKSHEGNQSDTSSLDPFPTALAVGGVEELLENQQLETQSRLSPPEKAAAPGSALSS
CTVVEGLLFPVEYYVRTTRRMSSCQRKVDLDAVILSQLGRSKKGQRSKCKPRDANSDQPS
QERAENYLELGVVPFPCLGAENDPANLGSPQGSLPASSGSSASLGSISQSSITSTGQDRR
RSQRKQKGRRKSASNPPALLVSPELIESLDVGMAREGSSLLTSECQSQKENCHAGLGKPP
SDERKFSAAAALGAAETGVAGAVETTSADPPPGGSQVLDKCRKTPLEQSQRPLQNSSSLP
PGNGASPIHAGDLEANFHVCQADGEPAEPVGNEQVPGACRAELLPAANVPLRRSLRCAAR
QRAGRHVAKGPESPEGPSLGLPAVDLDTCGSLFSFRSFQWLAPRLGVTDFHLPDEEFGLL
KLDRVESSPMNDLEVFVPSVFGDGLASEDTQGAQTNLEEKGLRSDLTSPFKTALPNSPPA
ESPAPKKELSTHELLFTPMGTVLAGAPTQSGSQISSCVFPAVGATPAVSPSVHSEVSPKT
PSIPPSLHSSNRASSQGVQDGGCKGSAILLHLDHCGAGPARQEEEQGPVFPAAAERGPSN
NCDGAVALEKHQHSESKQQGSGRASPEQEKAVAEQSAPVLLDGLREESLQLVSKLKDCSS
SCAVDVSTAWWEAAGCRELCVVTACESSVSLWKPLGPDRWARVHTWQLGEIPVIQIVPLP
DSCNLVCVALGDLEIGEIRLLLYSSENDSFKQSLVRTGNIKAVLGLKDRRLVSSSRTVQE
QHVEIVSFSETGRSRDGQTLMAPEETVSAFAEVEGMRDALVGTTAVNSVVVWNLRTGQLL
KKMHVGYSYPASICHRAYSDSGLLFVVLSHPHAKESESCGNPAFRVVAFNPSTARSRGVL
ASSLPPGHTGRYLEGDVRGALAAAVLTSGAVAVWDLLLGQ
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gagcaaacagctgatgcatttaagcatgttccccagttctacagccatgaggggggcctg
caggacagctcacaggcagaaagcatacaggctagccaggaaatcctgtgtgctggaatc
tccaggcccacccctgaggagaagaaaccccaaacctccagaagcttgctgaggctgagg
agacgggcgaaggctcgggtgtcaggggacaggggatcggtgtgtgaggtgctgctaagc
agcactggtgaaacggtgacaaatcaagttgccagtacaggggaacttcggtcaccagtc
ttcaggcaaagcagtgtctcagccactgaggaaactgcgccgagagcggcaggaccagca
catgtgcagagagaagagaacggtttcactcctcccagtgcagcatcgggagccacacaa
gcctctgtcccgccaggagcacctgagctcttcccacatgccctgcagggctgcagcagc
gtctggcagcctgaatcccagggtgctgtgcccacatctgacgaccctgagcctgcacag
ccatgttcagagaacagagactctgctttaggtgacgtcagtggtgatggaggaaaagaa
tcccccagtataataagacaaacgtctggtgagagtacgtgtgaagatcagggggaatta
tgtaggctcttggatttaatgtcagaaaatgaagtattgtctcctgacggaaataagact
gaaactaacgagaccaaaagccacgaagggaatcagagtgacactagtagcttagatccc
tttccgacagctcttgctgtgggtggtgttgaagaactgctggagaatcaacagcttgaa
actcagtcgagactttctcctccggaaaaggcggcagctcctggaagcgccctgagctcg
tgcacagtggttgaagggcttctcttcccggttgaatactacgtcaggacaactcggcgc
atgtccagctgccagaggaaggtggacctcgatgctgtaatcctcagccagctgggcagg
agcaagaagggtcagcgaagtaagtgcaagcccagagatgcaaattcggatcagccctcc
caagaaagagctgaaaattatttggagttgggggttgtgccgttcccctgtcttggtgca
gaaaatgatccagcaaatttgggtagtcctcagggatctcttcctgcctccagcggcagc
agcgcttcccttggatccatttcccagagcagtatcactagcacagggcaagatcggaga
cgatcacagaggaagcagaaaggaagaagaaagtctgccagcaacccccccgcgctcctg
gtgtcaccagaactcatcgagagcctggatgttggcatggcgagggaaggcagtagtctg
ctgacgagtgagtgtcagagccaaaaggaaaactgtcatgctggtcttggaaaaccacct
tcagatgagagaaagttctctgctgctgcagctcttggggctgcagagacaggagtggct
ggtgctgtagagacaacgagtgcggatcctcctccgggggggagccaagtgctggacaag
tgccgtaagactccgttagaacagtctcaaaggccactccagaacagcagctctctgccc
ccagggaacggagcttctcccatccacgcaggagatctggaagccaacttccatgtgtgc
caggctgatggagagccagcggagcctgtggggaatgagcaggtacccggagcctgcagg
gccgagctgctccccgcagctaacgtccccctgcgccgctccctgcgttgcgctgcgaga
cagagagcaggacggcacgtggcaaaaggtccagagagtcctgagggtccttctcttggc
ctccctgctgtggacctcgatacctgtggctctctcttctccttccgcagcttccagtgg
ctggcccccaggctgggtgtcactgacttccacttacctgatgaggaatttggactacta
aaacttgacagagtagaatcttcccccatgaatgacttggaggtgtttgttccgagtgtg
tttggagatgggctggcatcagaggacacacagggtgcacaaaccaatctggaagaaaaa
ggcctcaggagtgatttgacttcgcctttcaaaaccgcgttgcccaattcacctcccgca
gaaagcccagctcccaagaaggaactttccacccacgaattgctgtttactcccatgggg
actgtcttagctggtgctcccactcagtccgggtcccagatttcctcatgtgtgttccct
gccgtgggtgcaaccccggctgtgtcaccctcagtgcacagtgaggtgtcccccaagaca
ccttccatccctccgagcctgcattcctccaacagagcatcttcccagggcgtgcaggat
ggagggtgcaaaggctctgccatcctactgcacttagaccactgtggtgcaggacctgct
agacaagaggaggagcaaggtccagtgtttcctgcagcagctgaaagaggtcccagtaat
aactgcgatggggctgtggccttggagaagcaccagcactccgagagcaaacagcaggga
tccggcagagcttctcctgagcaggaaaaagctgtagcagaacagtcagctccggtactg
cttgatggcctgagagaagagagcttgcagcttgtatcaaagctaaaggattgttcgagt
tcctgcgccgtggatgtgagcaccgcgtggtgggaggcagcgggctgcagagagctctgt
gtggtgacagcctgcgagagctctgtctccctgtggaaacccctggggcctgaccgctgg
gcaagggtccacacgtggcagctcggagagattcctgtaatacagattgttcctctgcca
gactcctgcaatctcgtgtgtgtagcactgggagacttggagattggagaaataaggctc
ctgctttattcttctgagaatgactcattcaagcaatcactagtgagaactggaaacata
aaagctgttcttgggctgaaggacaggaggctggtcagcagcagcaggaccgtgcaggag
cagcacgtggaaatagtgtccttttcagagacaggaaggagcagggatggacagactttg
atggcccctgaagagaccgtttcagcttttgctgaagtggaaggaatgagggatgccctg
gttggcaccactgcagtgaacagcgttgtcgtttggaatctgagaacaggccagctcctg
aagaagatgcacgttggttattcctacccagcttccatctgccatcgagcctattccgac
tccggcctcctctttgtggttttgagccatccacacgccaaagagagtgagtcctgtgga
aaccctgcgttccgagtggtggcgttcaaccccagcacagccaggagcaggggggtgctg
gcctcctccctcccgcctgggcacactggaaggtacctggagggtgacgtgaggggcgcc
ttggccgcagccgtgctgacatcgggtgccgtggcggtgtgggacctgctcctgggccag
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integrated database retrieval system
