Nestor notabilis (Kea): 104401601
Help
Entry
104401601 CDS
T08494
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104401601 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnt03041
]
104401601 (DDX5)
03009 Ribosome biogenesis [BR:
nnt03009
]
104401601 (DDX5)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104401601 (DDX5)
Spliceosome [BR:
nnt03041
]
Complex A
U1 snRNP components
U1 related factors
104401601 (DDX5)
Complex B
104401601 (DDX5)
Ribosome biogenesis [BR:
nnt03009
]
Eukaryotic type
Pre-60S particles
Helicases
104401601 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104401601
NCBI-ProteinID:
XP_010007531
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MIFPRFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTV
QEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALS
GLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEY
SRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEA
DRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSAN
HNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMG
IHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIG
RTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDR
YSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQ
ASFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccctaggtttggagccccacgttttggaggaagtagaggtggacctctctct
gggaagaaatttggaaaccccggggaaaaactcacaaaaaagaaatggaatttagatgaa
ctgcccaaatttgagaagaacttttatcaagaacatcctgatgtagttagacgtactgtg
caagaagttgagcagtacagagcaagcaaagaagtcacagtcaggggccataactgtcca
aaaccgattattaatttctatgaagctaacttccctgcaaatgttatggaagttattcag
aggcagaacttcactgaaccaactgcaattcaagcacaaggttggcctgttgcattgagt
ggattggatatggtcggagtggcacagactggatcagggaaaacgctgtcttacttactg
cctgccattgtgcatataaatcaccagccattcctggagagaggagatggacctatttgt
cttgtgcttgcaccaactcgtgaactggctcagcaagtgcagcaagtggctgctgaatac
agcagagcgtgccgcttgaagtctacctgtatttacggaggtgctccaaagggaccacag
attcgtgacttggaaagaggtgtggaaatctgcattgcaacacctggaagacttatagac
ttcttagaagctggaaagaccaacctcaggaggtgtacttaccttgtccttgatgaagct
gacaggatgcttgacatgggatttgagcctcagatcagaaaaatcgtggatcagataaga
cctgacaggcagactctgatgtggagtgccacatggccgaaggaggtacgacagctggct
gaagacttcctgaaagaatatgtacacatcaacatcggtgcattagagcttagtgcaaac
cacaacattcttcagattgtggatgtgtgtcacgatgtcgagaaagatgacaagcttatt
cgcttgatggaagaaataatgagcgagaaggaaaacaaaacaattgtctttgtggaaacc
aaaagacggtgcgatgatctcaccaggaaaatgaggagagatgggtggccagcaatgggt
attcacggtgataaaagtcagcaggagcgggactgggttctaaatgaattcaaacatgga
aaagcaccaatcctgattgctacagatgttgcatccagaggtctagatgtggaagatgtg
aaatttgtcatcaattatgactaccctaactcctcagaggactatatccaccgaattgga
cgaactgcccgcagtaccaaaacaggcacagcatacacattctttactcctaacaatatt
aagcaagtaaatgacctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaa
ttgctccagctgattgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacaga
tattctgcgggcaaaaggggtggatttagtagttttagagagagggagaactttgagaga
acctatggtgctctaggcaagagagactttggagcaaaaacccaaaacggggcctacagt
gcccagagtttcagtaatggaactccttttgggaacggctttgcagctgcaggcatgcag
gccagcttcagggctgggaaccctgcaggagcttaccagaatggctatgaccagcagtat
gggagtaacatagcaaatatgcacaatggcatgaaccagcagcagtacgcctaccccgcc
actggtgctgctcctatgataggttacccgatgcccacaagttattcccaataa
DBGET
integrated database retrieval system
