Nestor notabilis (Kea): 104402121
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Entry
104402121 CDS
T08494
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104402121 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104402121 (BARD1)
04121 Ubiquitin system [BR:
nnt04121
]
104402121 (BARD1)
03036 Chromosome and associated proteins [BR:
nnt03036
]
104402121 (BARD1)
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104402121 (BARD1)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104402121 (BARD1)
Ubiquitin system [BR:
nnt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104402121 (BARD1)
Chromosome and associated proteins [BR:
nnt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104402121 (BARD1)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104402121 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
ANK_LRRK2
NIBRIN_BRCT_II
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104402121
NCBI-ProteinID:
XP_010008212
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
AGVLREPVSLGQCEHVFCLSCVGDCVGIECPVCHMPAWVQDAQINRQLDNMIQLCSKLRH
LLGADASDSTEGMSTPTGSDVGQKNKKEEIKMWFSPRSRKIRCIVNKSHPKTKSDDLCQD
TSSVYDFISSPPREKPSNLTKKPTQRQSKKMKKKRLADINKVWSLEKPEQKGRVEEKTLK
EKCVTICTEPVVLCTPESNSPEETVQQESAKEAVSSKNTENVGILPQVKSSEHKDNNEVV
CLPQVSKEKNCTTETSMSIENEATPLKRGREQSRLPDASQSKRPRRTERSIIGKSVGQAD
CLEELPQGSPVSPVTEHKTPVQVSSSVSKLTGTLIKTRSSAVSQATNSPSESPSTPSTSK
TSDQVEIPPSPSVLKLPGGNTIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKDN
AGWTPLHEACNHGHREVVELLLQHRALVNTTGYQNDSPLHDAAKNGHVSIVELLLLHGAS
RDAVNIFGLQPADYAESEKMKSVLMLPVKNESFPLNQPSEVNVQPRDGPLGILGSNLSLE
QQKLLNKLATVLKAQRCTDFNSRVTHLVIPDVPMPKTVNCMMAVLTGCWVLKFEWVRACL
RTTVREQEEKYEIKGGPRRGRLNREQLLPKLFDGCYFYFLGSFKHHQKCDLVELVKAAGG
QILVRQPKPDSDVTQTINTVAYHAESTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWMAPS
SWLIDCMMSFQLLPVK
NT seq
2212 nt
NT seq
+upstream
nt +downstream
nt
cgccggcgtcttgcgggagcccgtgtccctggggcagtgcgagcacgtcttctgcttatc
ttgtgtgggtgactgtgttggcatagaatgcccagtgtgccacatgccagcatgggtgca
agatgcacagataaaccggcaactcgataacatgattcagctttgcagcaagctgcggca
tctcctgggtgcggacgcctcagattcaacagaaggtatgtccacaccaactggctcaga
tgttggacaaaagaataagaaggaagagataaaaatgtggttcagcccaagaagtaggaa
gattcgatgcatcgtgaataagagtcaccctaagactaaaagcgatgacctttgtcaaga
tacatcttcagtttatgatttcatttcttcccctccccgtgaaaagccctccaacctgac
aaaaaagccaacacagagacagagtaagaagatgaagaagaaacgtctagcagacattaa
caaagtgtggagcttagagaagcctgagcagaaaggaagagttgaggagaagactcttaa
ggagaagtgtgtgaccatctgcactgaaccagtagtcctgtgcactccggaatcaaatag
ccctgaagagacagtccagcaggagtctgcaaaggaagctgtctccagcaaaaatacaga
aaatgtgggaatactgccacaggtaaaatcctcagagcataaagacaacaacgaggttgt
gtgccttccacaagtcagcaaggaaaaaaattgtactacagagacatcaatgtcaataga
aaatgaagctacacctttaaaacgtggaagggagcaatccagacttccagatgcttctca
gtctaaaagaccaagaagaactgagaggagcattattgggaagtcagttggtcaggcaga
ttgcttagaggagttacctcagggcagccccgtctccccagtgactgaacacaagacacc
agttcaggtttcttcctctgtatccaaactcactggtaccttaattaagacaagaagctc
tgcagtctctcaagcaacaaatagtccttcagaatctccctctaccccatctacttctaa
gacttctgatcaagtagaaataccacccagtccttctgtgttgaagttgcctggtggtaa
cacaattgccagaagaaattacaaaggagagactttactccatgttgcttccatcaaggg
tgacttagcagctgttgaacagctgctgaaaaatggggcagatcccaatgtcaaagataa
tgcgggctggacgccactgcacgaggcatgtaatcatgggcacagagaagtggtggagct
gttgctacaacacagggcgctagtgaatactacggggtatcagaacgactcgccgcttca
tgatgctgccaagaatgggcatgtgagcattgttgagctgctgcttttgcatggtgcctc
ccgtgatgcagttaatatatttggtctgcagcctgcggactatgcagaaagtgaaaagat
gaagtctgtgctaatgttaccagtgaagaatgaatcatttccacttaaccaaccctctga
ggtaaacgtccagccaagagatggacctcttggtatattggggagcaatcttagtttgga
acaacagaaattgctgaacaaactagcaacagttctgaaggctcaaagatgtactgactt
caacagcagagtaactcatctcgttatacctgatgttccaatgccaaaaactgtcaactg
tatgatggctgttctgactggatgttgggtcctcaagtttgaatgggtacgagcctgttt
gcggaccacagttcgagaacaagaagagaagtatgaaattaaaggtggcccacgaagagg
ccggctcaacagagaacagctgctgcctaagttgtttgatggatgctacttctatttttt
gggatctttcaaacatcaccagaaatgtgacctcgtggagctggtcaaagcagcaggagg
acaaattctggttaggcagccaaaaccagacagtgatgtgacgcagacaataaacacagt
ggcataccatgcagaatctacttctgaccagagattttgcactcaatatgtaatctatga
cgtgtcttctaaattcaagccggagaaaattcgtcaaggcaaagtctggatggccccctc
cagctggcttatagactgtatgatgtcatttcagctcctgcctgtaaaatga
DBGET
integrated database retrieval system
