Nestor notabilis (Kea): 104402231
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Entry
104402231 CDS
T08494
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnt03036
]
104402231 (CHD5)
Chromosome and associated proteins [BR:
nnt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104402231 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
DUF1087
Chromo
ResIII
HDA2-3
HTH_Hrp3
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
104402231
NCBI-ProteinID:
XP_010008349
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
GIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQ
REKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTW
EIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTV
KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK
EGHSKGPYLVSAPLSTIINWEREFELWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS
GKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLN
SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLL
GPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLN
IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVL
IFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGG
LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKR
KMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVPPF
SDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQ
NMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDEDFEDRPEGQSGRRQSRRQ
LKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGK
SEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEH
VNGKYSTPDLVLDGPDSKKSSEIVSSDPNTPIPASPAHAGPVSLTDKIETQLVFQEEREQ
VEQKCRKVSESQVGWLPSAAEKVEGEEHPESCDSKERPRDEKQEESERAVPSPEPLVKDE
GIQEKEKPLEKPELNSSPGRGEDKEVKAEDAKVEEKEQGEAQQNGDKEEEEDGKKDDRNV
NFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDI
QNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPS
HPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLP
SMLSRIPPVA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
gggatcccggagcgcgagttctttgtgaagtgggcaggtctgtcctactggcactgctcc
tgggtcaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccaacgg
aagaacgacatggatgagccaccggcctttgactacggctctggggacgaggacagccag
agggagaagcggaagaacaaagacccccattatgccaagatggaggagcggttctaccgc
tacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagcttcgataaa
aagggagatgtccattacctgatcaagtggaaggacctgccctatgaccagtgcacttgg
gagatcgacgagatagacatcccctactacgagaacctcaaacacctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctctcgtggatcctacggtg
aagttcgacaagcagccgtggtacattgacagcacgggcggcacactccatccttaccag
ctggaagggctgaactggctgaggttttcctgggcccaagggacagacacaatcctggct
gatgagatggggctggggaagactgtgcagactattgtgttcttgtactccctgtacaag
gagggccactcgaaagggccgtatctggtcagcgcccctctctccaccatcatcaattgg
gagcgtgagttcgagttgtgggcacccgacttctatgtcgtgacctacacgggggacaag
gaaagccggtcggtcatccgggagaatgagttttcctttgaagacaacgccatccgcagt
gggaagaaggtcttcaggatgaagaaggaagcgcagatcaagttccatgtcctgctcacc
tcctatgagctgatcactattgaccaggcggtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcgcacaggctgaagaacaaccagtccaaattctttagagtactaaat
agctacaagatcgattacaagctgctgctcactgggactccgctccagaacaacttggaa
gagctcttccacctcctcaatttcctgactcctgagaggtttaataacctggagggcttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggctcaaggcagacgtgttcaagaacatgccagccaagaca
gagctgatcgtgagagtggagctgagccagatgcagaagaagtactacaagttcatactg
acgaggaatttcgaagccctgaattcgaaaggtggtgggaaccaggtctcgctgctcaac
atcatgatggacctgaagaagtgctgtaatcacccctacctcttccctgtggcagcggtg
gaagctccagttctacccaatggatcctatgatgggaattctttggtcaaatcttctggc
aaactgatgctgctccagaagatgctgaagaagttacgggatgggggtcacagagtcctg
atcttctcccagatgacgaagatgctggacctgctggaggatttcctggagtacgaaggc
tacaagtacgagcggatagatgggggcatcaccggcggcctgcgccaggaggccatagac
aggtttaatgctcctggtgctcagcagttctgctttctcctctctacccgcgccggtggt
ctgggcataaaccttgctacggccgacacagtcattatttatgattctgactggaatccc
cacaatgacatccaggcgttcagccgcgctcaccgcatcgggcagaacaagaaggtgatg
atctaccgcttcgtgaccagagcctccgttgaggagcgcatcacgcaggtggccaagagg
aagatgatgctcacccacctggtcgtccgcccggggctcggctccaagtcgggctccatg
accaagcaggagctggatgacatcctcaagttcggcacagaagagctcttcaaagatgac
gtggaaggcatggtgtcgcagggacagcgcatcgccatgccagacgctgtcccccctttc
tctgacacgctgtcaaccaaagggggtgcagtgactcccggcatgaagaagaagcacggt
ggcaccccaccaggtgacaataaggacgtggatgacagcagcgtgatccactacgacgat
gctgccatctcgaagctgctggaccgaaaccaggatgcaactgatgacacggagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggac
ggtgtggaggaggtggaacgtgagatcatcaagcaagaggagaatgtggaccctgactac
tgggagaagctgctgcggcaccactacgagcagcagcaggaagatctggccaggaacttg
gggaaagggaagagaatccgcaagcaggtcaactacaacgacacctcacaggaggaccaa
gagtggcaggatgagctctctgacaaccagtctgagtattccatcggctccgaggatgag
gatgaagacttcgaagacaggccagaaggtcagagtggcaggagacaatcccgcagacag
ctgaagagtgaccgggacaagcctctccctcctttgctggcaagagttgggggcaacatt
gaggttcttggcttcaacgcccggcagcgcaaggctttcctgaacgccatcatgcgctgg
gggatgcctccccaggatgccttcaactcccactggctggtccgggacctgcgagggaag
agcgagaaggagttcagggcctacgtctccctcttcatgaggcatttgtgtgaacccggg
gcagacggtgccgaaacctttgcggatggtgttcccagggaagggctgtcacgccagcac
gtgctcactcggattggggtcatgtcgcttgtaaggaagaaggtccaggagtttgagcat
gtcaatggcaaatacagcaccccagatctggttctcgatggcccagacagcaagaagtcc
agtgagattgtgtcttcagatcccaacacccccatcccggccagcccagcgcacgcagga
cctgtctccctcactgacaaaatagaaacacagctcgtgttccaggaggaaagggagcaa
gtggagcagaagtgcaggaaggtgtctgagagccaggtggggtggcttccttcagctgct
gagaaggtggaaggtgaagagcacccagaaagctgcgacagcaaggagagaccgagggat
gagaagcaagaggagagtgaaagggctgtgccttctcctgagcccctggtgaaagatgag
gggattcaagagaaagagaagcctttggagaagccggagttgaacagcagcccagggaga
ggggaggacaaagaagtcaaagcagaggacgccaaggtggaggagaaggagcaaggtgag
gctcagcaaaatggtgacaaagaggaagaggaggacgggaagaaggatgacagaaacgtg
aacttccgattcatgttcaacatcgccgacggtggctttacagagctgcacacgctgtgg
cagaacgaggagagagctgccatctcctctggcaagatctatgacatctggcaccgccgg
cacgactactggctgttggcaggaatcgtcactcatggctatgcccgctggcaggacatc
cagaatgacccacgctacgtgatcctgaacgagcccttcaagtcggagatacacaagggg
aactaccttgagatgaagaacaagttccttgcccggcggttcaagttgctggagcaggcc
ctggtgatcgaggagcagctgcggagggcagcgtacctcaacatgacccaagaccccagt
cacccggccatggccctgaacgcccgtctggctgaagtggagtgccttgccgagagccac
cagcacctctccaaagagtccctggctgggaacaagcccgccaacgccgtcctgcacaag
gtgctgaaccagctcgaggagctgctgagtgacatgaaggctgacgtgacgcgcctgccc
tccatgctgtcccgcatcccgcccgtggcc
DBGET
integrated database retrieval system
