Nestor notabilis (Kea): 104402239
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Entry
104402239 CDS
T08494
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104402239 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nnt02000
]
104402239 (SLC6A4)
Transporters [BR:
nnt02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104402239 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
Motif
Other DBs
NCBI-GeneID:
104402239
NCBI-ProteinID:
XP_010008359
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATGKEAVPLTCKKDVSDCNKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGQ
AAQISNGYSGGQSSAPCNGLGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTTELPWTSC
TNAWNTGNCTNYFSKDNVSWSPHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFDYNYPYWTTVVGYCIGTSSVIFIPIYMVYRLIATPGTFKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaggcaaagaggctgtgccactgacttgcaagaaagatgtctca
gactgtaacaaaggagaagactgtaaagagaatggacttctggtcaggaaccctaaatct
gccctgcggctggtggaggatggcaacaaagtccatcccagccagggggataaagggcag
gcagctcagatctcaaacggttattcaggggggcagagctctgctccctgcaatggcctg
ggagaggtggaggatgcccagtgcacggccccagcagccaccaccaccactacgaccacc
acttccaccacctgtggagcagaaggccagcagcagctgatggagttggaagacagagag
acctggagtaaaaaaattgactttctactctctgtcattggctatgcagtggatctgggg
aatgtgtggagatttccttatatatgctatcagaacggaggaggagcattcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctattacaacaccattatg
gcttgggccttttactacctcatctcctccttcacaacggagctgccgtggactagctgc
acaaatgcctggaacacaggcaactgcacaaactacttcagcaaggacaatgtcagctgg
tccccacactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcac
aggtccaatgggctggatgacctggggggcattagctggcaactgaccctctgtttattg
ctaatcttcaccattgtatacttcagcatctggaaaggcgtcaaaacatctggcaaggtg
gtgtgggtgactgccacgttcccttatatcatactctttatcctgctcgtgagaggtgca
acgttgcctggcgcttggagaggtgtcctctactacctgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagattttcttctcccttggtccaggt
tttggggtcctgttggcttatgcctcctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgtgtgactagttttgtgtctggatttgtcattttc
actgtgctgggatacatggccgagatgaggaatgaagatgtatcagaggttgccaaagat
actggacccagcctcctcttcatcacgtacgctgaggccatcgcaaacatgcctgcttcc
accttctttgccatcatcttcttcctgatgttgctcacactgggattagatagcacgttt
gcaggactagagggagtgattactggagtcctggatgaattcccacatgtctggagcaaa
cgcagggaactgtttgtccttggtctgatcatcatttgcttcctagggtcattagcgacc
ctgacatttggaggtgcatatgtggtaaagctgtttgaggaatacgctacgggtccagct
gtccttaccgttgtgtttctggaagcggttgctgtgtcctggttctatggcatcacccag
ttttgcaacgatgtgaaagaaatgctaggctctgccccaggctggtactggcgagtttgc
tgggttgcaattagtcccatcttccttctgtttgtcacttgcagcttcctgtccaaccct
cctgagctacggctttttgattataactatccctactggaccacagtagtgggttattgc
ataggaacctcttcagtcatcttcattccaatctacatggtctatcggttgatcgccaca
ccaggaacctttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaatgcagtataa
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