Nestor notabilis (Kea): 104403413
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Entry
104403413 CDS
T08494
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104403413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnt03032
]
104403413
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104403413
DNA replication proteins [BR:
nnt03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104403413
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104403413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104403413
NCBI-ProteinID:
XP_010009847
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MKRGKEPVFVKFIKSAGRSEYFYKALESMKEFQSEEHLQILEEETALNIKENDKSLYICD
PFTGVVFNHLKQLGCRIVGPQVVLYCIQAQRCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQLMGGRVYRDLSVAVTHLIAGEVGSKKYVVAASLKKPILLPAWVKTLWDKSQQ
SIMRYTDVNMEDYACPVFLGCTICVTGLNTSDRKEVQHLTVEHGGHYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSIKWFSDSIEKGFCQDETIYKIEAGSKLTPSTSTPTNDVR
KPDNHALPDVSHISNINLSGVNETEFSSALSSRQDPLPDELENLDISSFQAPEDLLDGCR
IYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNEELKQFLEKTSHRPHVVT
AKWLLDSFSKDYLQPVEQYIPLNYQLLENPILEQPGMKSVLPKNNNLMKKEAVNVKKHQK
AAEDDLLSQYIANDSTLDEAGKLPSRTFSDVTHLTVQGENESSIHSGFLGESSALAEGGL
FVRKSFLILGFGEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVQLTVGDVVT
NAWLLTCVEQQLLLDPQSNPLFTPIPVMEGVTPLEDCVLSFTQFTGAERDSLVYLAGLLG
ARVQEFFVRKANAKKGMFASTHLVAREADGSKYEAAKKWNLPAVTVAWLLDSARTGKRAD
ESKFLVEDAEAEDERSITQLNKTPATVKSPDVKQYNYLLEAGRKTAVTPLDISRFQSKAF
QAVISRHMEKTTPVAQGGVLQKDPSLHLDTPSKFLSKDKLFKPSFDVKDALAALESPVGS
DQKTRKPSTPLSEVISXXXXXXSRNLKLALANSTRHVEALTATPQLTAAQPEEEEERKPL
ADVVIYVSKKLSKKQSELNAVAASLGAHYRWCFDESVTHFIYKGGQNDSNKEYKSVKERG
ICIVSEHWLLECAQEYKRLPESLFPHTYNPKMSLDISAVQDDRLSSSSKLPSTGKPSEET
EIIPVDEDDVEDDATTDQIKEMVTAGEEEIGASESKGVLTQALEMRENFQRQLQEIMSAT
SLVKPPGQRGSLSRNSTDGSPTTPDSTRSARNGRSRVLEALRQSRQAVADINTEPSQSEQ
IIWDDPTAREERARLVSNFQWPNSPSQYTEQGQSNASKNMDESAFKGSLADAEIAAIALP
EAADGDVIEGLKNPVCGDPETPIKDHLIPTLQTPSIAFPLAN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtggtaaggagcccgtttttgtgaagttcataaagtctgctgggaggtcggag
tatttttataaggctcttgagtctatgaaagaatttcagtcagaagaacatctccagatc
cttgaagaagagacagcgctcaatataaaagaaaatgataaatcactttacatttgtgat
ccttttacaggtgttgttttcaatcatctcaaacagcttggctgtaggattgttggacca
caggtagtcctgtactgtatacaggcccagagatgtgtcccaagagctgagtatcctgtg
tacaacatgaccatggccgatgtaacagtatcctgtaccagccttgaaaaagatgttagg
gaagaagttcataaatatgtgcagctgatgggtggacgtgtgtacagagacctcagtgtg
gcagtaactcatctgatagctggagaagttggcagcaagaaatacgtagtagctgcttct
ctgaaaaaacctattttgcttccagcttgggttaagacactgtgggataagtctcaacaa
agcataatgagatacactgatgttaacatggaagattatgcatgccctgtgttccttggc
tgtacaatttgtgtaactggcctaaacacttcagacaggaaagaagtccaacacctcact
gttgaacatggtgggcactatacggggcagctcaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgctaaaaaatggaatgtgcactgtgtg
tctatcaaatggttttctgacagcattgagaagggcttctgtcaggatgagacaatatat
aaaatagaagctggatcaaaactgacacccagtacgtcaacacctacgaatgatgtcagg
aagcctgataatcatgcccttccagatgtcagccacatttccaacatcaatttgagtggt
gttaatgaaaccgaatttagctctgctctgagcagcaggcaggatcctcttcctgacgag
ctggaaaacttggatataagttcttttcaagcccctgaagatttgttagatgggtgtcga
atctatctgtgtggcttcagtggcaggaagttggacaagatgaggcggcttattaattgt
ggtggtggtgttcgatttaatcaacttaatgaagatgttacccatgtcattttgggagaa
aataatgaggagctgaaacagtttttggagaagacatctcacaggcctcatgtagtcaca
gcaaaatggttgctggactcatttagtaaagattatctacagccagtggagcaatatatc
cctctaaattaccagctgttagagaatccaattttggagcaacctggaatgaagtcagtt
cttcccaaaaataacaatctcatgaagaaagaagctgtgaatgttaaaaagcatcagaaa
gctgctgaagatgacctcctctctcaatacatagctaatgattctacattagatgaagct
ggaaaactaccatcgagaaccttcagtgatgttactcacttgactgttcaaggagagaat
gaatcttccatccacagtggttttctgggagagtcgtctgcgctagctgaaggaggattg
tttgtcagaaagagctttcttattttgggttttggtgaagaggacgagtcctgcattgca
gatattataaaggagaatgctgggaagatcctgccactgcaaagcagaaccattgcagac
tatgctgtggtacctctactggggtgcacggtgcagctgactgttggtgatgttgtcaca
aatgcatggctgttaacatgtgtggaacagcagctccttttagatccccagtccaatcca
cttttcacaccaatcccagtaatggaaggagttacccctttggaagattgtgttctttct
tttacccagttcactggtgcagagagagactctctggtttatctggcaggactgctagga
gccagagtccaagaattctttgtacggaaagccaacgcaaaaaagggcatgtttgccagt
acccaccttgtagcgagagaagcggatggttccaaatacgaagctgcaaagaagtggaat
ttaccagcagtcactgtagcttggcttttggactctgcaaggacaggaaagagagcagat
gaaagcaaattcttggttgaagatgcagaggctgaagatgagagatccattactcagctt
aacaagacaccagcaactgttaaatctcctgatgtaaagcaatataattatcttcttgaa
gctggaagaaaaacagctgtgactcctcttgatatcagcaggttccagagtaaagctttc
caagctgtcatctctcgtcacatggagaagacaacccctgtggcacaagggggagtgcta
cagaaggacccgtctttacatctcgatacaccatcaaaatttctttccaaagacaagtta
ttcaagccttcttttgatgtaaaggatgctctggcagctttggagagtccagtaggttct
gatcaaaaaaccaggaagccgagcacacccctctctgaagtcatcagcnnnnnnnnnnnn
nnnnnnagcaggaacttgaagttggcactggcaaacagcacaaggcatgtagaagctctg
actgccaccccacagctgactgctgcacagccagaagaggaagaagagcgcaagcctcta
gcagatgttgttatatatgttagtaaaaaacttagtaagaagcaaagtgaactgaatgca
gtagcagcttctctgggggcacactacaggtggtgctttgatgaatcagtaacacacttc
atctacaagggaggacaaaatgacagcaataaggagtacaaatcagttaaagaacggggt
atatgtattgtttcagaacactggcttttggagtgtgcccaagaatataaacggcttcct
gaatctctctttcctcacacatacaatcccaaaatgagcctggacatcagtgcagtgcaa
gacgacagactctcttcctccagtaagcttccatcaactggaaaaccatcagaggaaact
gagattattccagtggatgaagatgatgtggaagatgatgcaactactgaccaaataaag
gaaatggtcactgcaggggaagaagaaattggagcaagtgaatccaaaggagttttaacc
caagcactagaaatgagggagaacttccaaaggcagctgcaggagatcatgtctgccaca
tcactggtgaaaccaccagggcaaagaggatccctttcaaggaacagtactgatggttct
ccaactactcccgatagcacacggtctgcacggaatggccgcagtagggtcttggaagct
ctcaggcagtcccgccaggctgtcgcagatataaacacggagccatcccagagtgagcag
atcatctgggacgatcctactgcccgggaggagagagcaagacttgtcagcaactttcag
tggcctaatagtccttcccagtacactgagcaaggtcaaagtaatgccagtaagaacatg
gatgaatctgccttcaaaggatctttagctgatgcagagattgctgctatagctcttcct
gaggctgcagatggagatgtcattgaagggctaaagaatcctgtatgtggagatcctgaa
acaccgattaaagatcacttgattcccactctgcagacccccagcattgctttcccactg
gctaac
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