Nestor notabilis (Kea): 104403627
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Entry
104403627 CDS
T08494
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnt03009
]
104403627 (IGHMBP2)
03012 Translation factors [BR:
nnt03012
]
104403627 (IGHMBP2)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104403627 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104403627 (IGHMBP2)
Ribosome biogenesis [BR:
nnt03009
]
Eukaryotic type
Other ribosome biogenesis factors
104403627 (IGHMBP2)
Translation factors [BR:
nnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104403627 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Helicase_RecD
ResIII
AAA_16
Viral_helicase1
nSTAND3
DEAD
SLFN-g3_helicase
UvrD-helicase
AAA_22
AAA_25
Flavi_DEAD
IstB_IS21
ABC_tran
AAA
T2SSE
DAP3
Herpes_ori_bp
NTPase_1
NPHP3_N
cobW
DnaB_C
PhoH
Motif
Other DBs
NCBI-GeneID:
104403627
NCBI-ProteinID:
XP_010010147
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
AWQESVPLKELQRRGVCLLKLHAASQRTGLYGRLLVTFQPRKHDLDAELPSNSFGPGDIA
GLYEAASQGDALCTGIVTRVTSRAVTVAFEDPQDTLSLDHERSYRLLKLANDVTYNRLKK
ALNALKQYRGGPASDLIDVLFFSAEPRAFSETKPLQLYNNSLDASQREAVSFSLAQRELA
IIHGPPGTGKTTTLIEIILQAVQQGLKVLCCAPSNVAVDNLVERLARHSLRILRLGHPAR
LLEPIQRHSLDAVLARGDAAQIVADIRKDIDQAWTKSKKAQDKGERSHFLNEIKTLRKEL
KEREETAVAAALSHASVVLATNTGASSEGPLKLLPDNHFDLVVIDECAQALEASCWIPLL
KAPKCILAGDHKQLPPTIISHKAAAKGLALSLMERLIGRYGQRVVKMLVVQYRMHEAIMQ
WASSELYDGRLTAHPTVAQHLLKDLPGVTSTEETTTPLLLIDTAGCGLFELEVEDEQSKG
NPGEVQLAGLHVQALVEAGVKAKDIAVVAPYNLQVDMLREHLGHSYPELEIKSVDGFQGR
EKEAVILSFVRSNRK
NT seq
1667 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaggaaagtgtccccctgaaggagctgcagcgcaggggtgtctgcctgctgaa
actccacgctgccagccagagaactggcctctacggccgcctgctcgtgaccttccagcc
taggaaacacgacctagatgctgagctgccttctaatagctttgggcctggagacatcgc
cggcctgtacgaggcagccagccagggtgacgcgctctgcacgggcatcgtgacacgtgt
cacctcccgagcagtgacagtcgcctttgaggaccctcaggacacactgagcctggacca
tgagcgctcctaccgcctgctcaagctggccaacgatgtcacctacaacaggctcaaaaa
agctttaaatgcactgaagcagtatcgggggggtccagcctctgacctcatcgacgtcct
cttcttttctgctgagcccagagcattcagtgaaacaaagcctctgcagctttacaacaa
ctcactggatgcatcgcagagggaggctgtctccttctcactggcacagagggaacttgc
catcatccatggaccacctggtacaggaaagaccacaacactaatagagatcatcctgca
ggcagtacagcaaggcctgaaagtgctgtgctgtgccccctccaacgtggcagtggataa
cctggtggagaggctggccaggcacagcctgcgcatcctgcggctggggcaccctgctcg
cctgctggagcccatccagcgccactccctggatgcggtcctggctcggggagatgctgc
ccagatcgtggcagatatcaggaaggacatcgaccaggcctggacaaaaagcaagaaggc
tcaagacaagggggagcggagccactttctcaatgagatcaagaccctgagaaaggagct
gaaggaacgagaagaaactgccgtggctgcagccctctcccacgccagcgttgtccttgc
taccaatacnggtgcttcctctgagggtcccctgaagctgcttcctgacaaccactttga
cctcgtggtgatagatgagtgtgcccaggcgctggaagccagctgctggatacctctgct
gaaggctcccaagtgcatcctggctggggaccacaagcagcttcctcccaccatcatctc
ccacaaagctgctgccaagggccttgccctcagcctgatggagcggctcatcgggaggta
cgggcagagggtggtgaagatgctggtggtgcagtaccgcatgcacgaggccatcatgca
gtgggcttcctccgagctctacgacggccgcctcactgcacaccccactgtagcccagca
cttgctcaaggacctgccgggtgtcacctccacagaggagaccacaactcccttactgct
tatagacactgctggctgtggcctgtttgagctggaagtggaagatgaacagtccaaggg
caacccaggggaggtgcagctggctggtttgcacgtccaagccctggtggaagctggtgt
gaaggcaaaagacatcgctgtggtagccccctacaacctgcaggtggacatgctgagaga
gcaccttggccacagctacccagagctagaaatcaaatcagtcgatggtttccagggaag
agagaaagaggcagtgatcctgtcattcgtgagatccaaccggaaag
DBGET
integrated database retrieval system
