Nestor notabilis (Kea): 104404170
Help
Entry
104404170 CDS
T08494
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nnt03000
]
104404170 (SOX5)
Transcription factors [BR:
nnt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104404170 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
104404170
NCBI-ProteinID:
XP_010010837
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
TPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHD
EQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIP
VFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQL
YAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKP
KTSDGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARANTIDILSSITSSGYLND
HDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLETLTQQLAVKQ
SEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGKPSPHSP
HLPSEPSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEMQTDDVNGEIYDEYDEEEDDPDAD
YGSDSENHIAGQAN
NT seq
1847 nt
NT seq
+upstream
nt +downstream
nt
aaacacccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgg
gatcagggaactttggagaaataaaagggactccagaaagcctcgctgagaaagaaaggc
agctcatgggtatgatcaatcagctgaccagtttgcgagaacagctgctagcagctcatg
atgaacagaagaaactggctgcatcgcagattgagaaacaacgccagcaaatggagctgg
ctaagcagcaacaagaacagatcgcaagacaacagcagcagctcctgcaacagcaacaca
aaattaaccttcttcagcaacagatccaggtccagggtcagctgcctccattaatgattc
ctgtattccctccagaccaacgaaccctagcagcagctgcacagcaaggattccttcttc
ctcctggtttcagctacaaagcgggatgcagtgacccttaccccgttcagctgatcccaa
ctaccatggcagctgctgccgcagcaacaccaggcttaggcccgctccaactgcagcagt
tgtatgctgcccaacttgctgcaatgcaagtgtctccaggaggcaagatacctggcatac
cccagggtaaccttggtgctgctgtatcccctaccagcatccacacagacaagagcacaa
acagccctccacccaaaagcaaggatgaagtggcccagccgctgaacctttcagccaaac
ccaagacatctgatggcaagtctcccacatcgcccacctctcctcatatgccaactctga
gaataaatagcggggccagttcactaaagtcctccgtgccagcaacattagctagtcctt
cagccagagctaatacaatagatatcctttcttctatcacgtcgtcaggttatttaaatg
accatgatgctgttaccaaggcaatccaggaggcccgacagatgaaggagcaacttcgga
gggaacaacaggtgctggacgggaaggtggctgttgtgaatagcctgggtctcaataact
gcaggacagaaaaggacaaaacaacactggagaccctgactcagcaactggcagtaaaac
agagtgaagacgggaagtttagccacgcaatgatggatttcaacatgagtggagattctg
acggaagtgcaggagtttcagagtctagaatttatcgggaatcaagagggcgtggtagca
atgagccccacatcaagcgcccaatgaatgcattcatggtgtgggctaaagatgaacgga
ggaagatccttcaagccttccctgacatgcacaactccaatatcagcaagatactaggat
ctcgctggaaagctatgacaaacctagagaagcagccatactatgaggagcaggcccgac
tcagcaagcagcacctggagaaatacccagactacaaatacaagccaagaccgaagcgta
cctgccttgtagatggcaaaaaattacgcattggcgagtacaaggctatcatgcgcaaca
gacgccaggagatgaggcagtattttaatgttgggcaacaagcacagattcccattgcca
ctgcgggcgtagtttacccaggagccattgccatggcaggaaagccttccccccattccc
cacatctgccctctgagccttcgagcgtgtccagcagcccggagcccgggatgcccgtca
tccagagcacttatggcgtcaaaggtgaggagcctcatatcaaggaagagatgcagaccg
atgacgtcaatggagaaatctacgatgaatacgatgaggaagaggatgaccctgatgcgg
actatggcagtgacagtgaaaatcacattgcggggcaagccaactga
DBGET
integrated database retrieval system