Nestor notabilis (Kea): 104404481
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Entry
104404481 CDS
T08494
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104404481 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnt03041
]
104404481 (DDX46)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104404481 (DDX46)
Spliceosome [BR:
nnt03041
]
Complex A
U2 snRNP components
U2 related factors
104404481 (DDX46)
Complex B
104404481 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104404481
NCBI-ProteinID:
XP_010011219
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MVRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRSRDR
KRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKAENRSRSKEKTEG
VEVSKEKKKDKDDKEEEKDKDATPNTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAM
ENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEV
KKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSSEEE
EVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEG
ITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTG
SGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIV
IEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRD
SIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYA
YTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFK
FDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAP
TPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTV
SAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTS
KEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKE
ELIRLQNSYQPTNKGRYKVL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggcactatcggaagcgctccgcctcacggggccgctccggcagccgctccagg
agccggtccccctctgacaagaggaaacgtgaagacagacgctccagaagtcgggatcga
gaccggagacgtgagaggtcccgcagcagggacaagaggaggtctcgctcacgggacagg
aagcgccaaagacgttcaagaagcagagaaagggaacggagccgagagaggagaagatcc
cggagccgagagaggaggcgttccagaagcaggagcagaggcagacggtctcgatcctcc
agtccaagcaagaacaggaaagcagaaaacaggtcaagatctaaagaaaagacagaaggt
gtggaagtttccaaagaaaagaagaaagacaaagatgacaaagaagaagagaaggataaa
gatgcaaccccaaatactgtggccactgagaattttgatcagaacaaactagaagaagag
atgagaaaacgaaaagagagagtggagaaatggagggaagagcagcgcaagaaggcgatg
gaaaacatcggagagctgaaaaaggaaattgaagagatgaaacaggggaaaaaatggagt
ttagaagatgatgatgatgatgaggaggaaactgcagaaggagaaaaagaaggcaacgag
gttgaagatgaagagttagatcctttggatgcttacatggaagaagtaaaagaagaggtc
aagaagttcaatatgagaagcgtgaaaggtggaggtgggagcgaaaagaaatccggacca
actgttaccaaggtagtaactgtggtgacaaccaaaaaggcagctgcagagtcagaaaag
aagaaaggggagctcatggagaacgaccaagatgcaatggagtattcctcagaagaggag
gaagttgatcttcagactgccctgactggctatcagaccaagcagaggaagctgctagaa
ccagtggatcatggcaagatcgaatatgaacctttcaggaaaaacttctatgttgaagta
ccagaactagctaaaatgactcaagaagaggtgaatgtgtacaggctggagctggagggg
attacagtcaagggaaaaggctgccccaagccaataaaaacctgggtacagtgtggtatt
tccatgaagattctcactgccctcaaaaagcatggctatgaaaagcccactcccattcag
acccaggctatccctgcaattatgaacggccgtgatttgatcggcattgctaaaacagga
agtgggaaaactattgcttttctgttacccatgttcagacacattatggatcagagagcg
ttagaagaaggagaaggtcccatagctgtcatcatgacacctactcgtgagttggctttg
cagatcaccaaggagtgcaagaaattctccaagacacttgggcttcgagttgtctgtgtt
tatggagggacaggaatcagcgaacagattgctgaactcaaaagaggtgctgaaataatt
gtttgcacacctgggcgtatgattgacatgttagcagctaacaatggccgggtgacgaat
ctccgtcgagtcacatatgttgtacttgatgaagcagacagaatgtttgacatgggtttt
gagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagactgtcatgttc
tctgctacttttcccagagctatggaggcactagctcggagaatcctcagtaaacctata
gaagtgcaggttggaggcagaagtgttgtctgttctgatgtggagcaacatgttattgtc
atagaagaggagaacaagtttttgaagttactggagctcctgggacactatcaggagaaa
ggatcggtgatcatctttgtagataaacaagaacatgctgatgggttgttgaaagattta
atgagagcctcttacccttgcttgtctcttcatggaggcattgatcagtatgacagggac
agcatcattaatgatttcaagaatggaacttgtaaacttctggtggccacatctgtagca
gcgaggggtttggatgtgaaacagttgatgctggtggtcaattacagctgtcccaaccat
tatgaagactatgtgcaccgagcaggaagaactggacgagctggcaataaagggtatgcg
tatacgttcattactgaggatcaggcacggtatgctggtgatatcattaaggctttggaa
ctgtctgggaatccaattcctactgatttggagaagctctgggctgacttcaaagaccaa
cagaaggctgagggaaagctgattaaaaaaagcagtggattctctggcaaaggttttaag
tttgatgaaacggaacaggctttggctaatgaaaggaagaagctacaaaaagcagctctt
ggcttgcaagactcagatgatgaagatacagctgtcgatattgatgaacaaattgaaagc
atgttcaattcaaagaaaagagtaaaggacatggcagcaccaggaacatcaaatgctcct
accccatccgctggaaatgcagagaaattggaaattgctaaaagactggctttgagaatc
aatgctcagaagaatcttggagcagaggcacaagtattggttcccttccacttcaaggat
gtgatgcagcaggctacaaacgctatcctgagaggaggcacaattcaagctcctactgta
tctgccaagaccattgcagagcaactggctgaaaaaatcaatgctaagctcaattacgta
cccatagagaagcaggaggaggagaaacaggatggaggacaaaatgaatccttcaagaga
tacgaagaagaattagagatcaatgacttcccacagactgccaggtggaaagttacctcc
aaagaggcgctgcagagaatcagtgaatattctgaagctgctattacaatcagaggaact
tacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttggctatagag
agtgccaacgaactggctgtacagaaagcaaaggcagaaatcacacgacttataaaagag
gagctcatcagattgcaaaattcgtaccaaccaaccaacaagggaagatacaaagttctc
tga
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