Nestor notabilis (Kea): 104405401
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Entry
104405401 CDS
T08494
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnt04121
]
104405401 (ZSWIM8)
Ubiquitin system [BR:
nnt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104405401 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ifi-6-16
Motif
Other DBs
NCBI-GeneID:
104405401
NCBI-ProteinID:
XP_010012417
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTLWGKG
GGGGGGSGRTRGNDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPEN
EEDIRLYSCLANGSADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAV
MFDRCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFA
QYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSD
NIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVRE
MFKRRDSNAAPLLEILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHAC
ASMCDEMVILWRLAVLDPTVSPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFK
PAVEACYFNWEEAYPIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAEIACEAGRTHGQEP
GGPCLQPGDRLRPSPQEPAVRPKELTGKRKAVSETPQRVLRRLSAEGDKAVYKTAVGKAK
LPVSKGLTSKHSGKRRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYR
DTFEEDGGVYFSEGPEPSVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEV
GENGAAGGGDDGEEEDDYQVYYLNPQEVAKEDDDKGEGGNEEEDVFAGIKPLEQENRMEI
LFACAEALHAHGYSSEACRLTVDLARDLLANPPDLKVEQPPTKGKKIKVSTSKQTWMATN
TLSKAAFLLTVLSERLEYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKI
PLGTSEMNSIRGRAEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNN
EMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKI
LDKLLDRESQTHKPQTLSSFYSSSKPAVANQKSPSKHAAQSTAAIQQLPGASVTQQAAVS
TAVQSSPENFVEKSAQDNSQKSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPV
RQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGS
SSSSGSRRASGGARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGG
NSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQ
AMEIGSAALNILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNP
NEIQRALVQCKEQDNTMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQ
REGATGCSASGARAGLTDNRVTSEPTTVTVATSVTATASVMPVISVGSTMYQQHTMAGPA
MAHTHTQGLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYP
YSVTPPSLAATAVSFPGVPVPSMTQIAVHPYHSETGMSLSSNVASKLQLWAVCSIGNVHA
GSTFPAIQGASMTTMSSQPNSLVTGSFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEML
GRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIME
ALQRLNPAHVHNHLRTPAFHQLVQRCQQAYMQVMXHRLIHLTPADYDDFVNAIRSARSAF
CLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcggagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttcctttatctctgaggcggaaagcctttgccagaac
tggagaggatggaggaagcaatcggcaggacccaattctcccactttgtggggcaaagga
ggggggggtggtggtggtagtggtaggacaaggggcaatgatgggctggtgatcccattg
gtggaactgtctgcaaagcaagttgcatttcacattccattcgaggtggtggagaaagtt
tatcctccagtgcctgagcaactgcagcttcgaatcgccttctggagtttcccagaaaat
gaggaagatatcagattgtactcgtgtttggcgaatggcagtgcagatgaattccagcga
ggggagcagctgttccgggtgagggctgtcaaagaccctctccagataggcttccatctg
agtgccactgtggtacccccacagatggtgcctcccaaaggtgcatacaacgtggcagtg
atgtttgaccggtgcaggatcacatcatgcagctgtacctgcggagctggggccaagtgg
tgtgctcacgtcgtggcactctgcctcttccggatacacaatgcatctgcagtatgttta
cgagcacctgtttctgaatccttgtctcggctacaaagagaccaattgcagaaatttgct
cagtacctaattagtgaacttccacaacagattcttccaacagctcagcgcttgctggat
gagctgttatcttctcagtctactgccatcaacacagtgtgtggagccccagatcccact
gctggaccctctgcatcagatcaaagcacctggtacttagatgagtctactctgagtgac
aacataaagaaaacccttcacaaattctgtggaccctctcctgttgttttcagtgatgtg
aattcaatgtatctctcttccacggagccaccagctgctgctgagtgggcctgccttctg
cgtcccctgcgaggaagagagcctgaaggaatctggaacctgctttctattgtgcgagag
atgtttaagaggcgggatagcaatgcagctcctttgctggagattctgactgatcagtgt
ctcaactatgagcagataaccggctggtggtacagtgtgcgaacatctgcatcacacagc
agtgctagcgggcacacaggacgcagcaatggccagtcagaagtagctgctcatgcttgt
gcaagtatgtgtgatgagatggtgattctttggaggctggctgtccttgacccaactgtt
agtccacagaggcgcagggacctttgctcacagctcagacagtggcagctgaaagtcata
gataatgttaagaggggtcagcacaagaaatcactggagaagctcttccagggtttcaag
ccagctgtggaagcctgttacttcaactgggaggaagcttatcccattcccgggattaca
tatagcagcactgacaagaaaaactcattctgttgggtaaaggccatccagcagaggagc
tgccggttgcagtgtgcagaaattgcctgtgaggctggccgaacccatggacaggagcct
gggggaccgtgtctgcagcctggagacaggctgcgtccctctccccaggagccagcagtt
cgtccgaaggaactcactgggaagcggaaagctgtctcggaaacaccgcagcgggttctg
aggcgactttcagcagaaggtgacaaagctgtgtataagactgcagtgggcaaagcaaag
ttgccagtgagcaaaggcttgaccagtaaacatagtgggaaacgccgcatgagcagtgaa
gacagctctctggagccagacttggcagagatgagcctggatgacagcagcttggctctg
ggggcagaagccagcaacacatttagttttacagaaagtccactgagcaggagctacaga
gacacctttgaggaggatggtggcgtgtacttctctgagggacctgagcccagtgtcagg
agcagttccatggctaagaaatcacccaaggatcctgtgggggaaatgggtagtggtgat
gatgacttgccctctgcagatgagaacagtggtggtgtgagcctgaagccagaagaagtg
ggagagaatggtgcagcagggggaggagatgatggagaggaggaagacgactaccaggtg
tactatctgaatccacaagaggtagccaaggaagatgatgacaaaggtgaagggggaaat
gaagaggaggatgtatttgctggtataaagcctctggagcaggagaaccggatggagatc
ctgtttgcctgcgcggaggccctgcatgcgcatggatacagtagtgaagcatgccgctta
accgtagaccttgccagggatctgctggccaaccctccagatctcaaagtggagcagcca
ccaacaaagggcaagaagatcaaggtatcaaccagcaagcagacatggatggcaaccaac
accttatctaaagctgctttcttgctgactgtgttgagtgagcgactggagtaccacaac
ttggccttccaaatagggatgtttgctctggagctgcagagaccacctgcctctacaaag
gctctggaggtgaagctggcatatcaggagtctgagattgtagccctcttgaagaagatt
cccttgggcactagtgagatgaacagtattcgaggaagagctgaagaactgcgagaaggg
acattatgtgattaccgtcctgtcctgcctctgatgttggctagttttatatttgatgtc
ctgtgcactccagtggtttctcctacaggctctagacctccaagccgtaattggaataat
gaaatgcctggagatgaagaacttggttttgaggcagctgttgctgctcttggcatgaaa
acaactgtcagtgaagcagaacatcctctattgtgtgaaggcacccgaagggagaaaggt
gatctggcgctagccctgatgattacttacaaggatgatcagtctaagctgaagaaaatt
ttagacaaactcctggacagagagagtcagactcataaaccacagactctgagttccttc
tactcatccagcaagcctgcagtagcaaatcagaaatcgccttccaaacacgctgcccag
tccactgcagctatccagcagcttccaggggcttctgtcactcagcaagctgctgtaagc
actgcagtccagagcagtcctgagaactttgtggagaagagtgcacaggacaactctcag
aagtccccctgtgagccagctgcagaggccactgtcctaaaacaagagggaaaggtcccc
agtcgtctggcccttggaaaccgaggtggatacaatgggagatgctggggttcacctgtc
aggcagaagaagaaacacacaggcatggctagcatagacagcagcgctcctgaaaccacg
tctgacagttctccaacactcagtcggcgtccgctacgcggaggatgggcaacaacatcc
tggggcagaggacaggacagtgacagcatcagcagttcttcaagtgattcgctgggatct
tcctcttccagtggcagtaggagagccagtgggggagcccgtgcaaagacggtggaagtt
ggcaggtacaaagggaggcggctggagagccatgctcctcatgttccaaaccagccctca
gaggcagctgctcacttctactttgaattggccaagacagtccttatcaaagcaggtgga
aacagcagtacctctatctttacccacccttcctccagtggtgggcaccagggaccacac
cgcaaccttcacctctgcgccttcgagattgggctgtatgcactaggcctgcacaacttt
gtgtctcctaactggctttctcgaacctactcctcccatgtctcttggatcacaggacaa
gccatggagattggtagcgcagccttgaacatcttggtggagtgttgggatggacatctg
actcccccagaggtggcatccttggcagacagagcttctcgggccagagactccaacatg
gtgcgggcagctgctgaactagcactcagctgcctgccccatgcccatgccctgaaccca
aatgagatccagagggctctggtgcagtgcaaggaacaggataatacgatgctggaaaag
gcctgtatggcagtagaagaggcagccaaaggaggtggtgtgtacccagaagtcctcttc
gaagtggctcaccagtggtactggctttatgaacagactgttggtgggaccccagcccag
agagaaggtgccactggctgcagtgccagtggtgcacgggctgggttgacggacaaccgg
gtgacctctgagccaaccaccgtaacggtggcaacttcggtaaccgcaacagcatccgtc
atgccggtcatctctgtggggtcaaccatgtaccagcagcatacaatggcaggaccagca
atggcacatacacacacgcagggtctccacccctacaccacccttcagactcacatcccc
tgtaacccacagtatattggacacactatccagcacatgccacgcccggctgtcttccca
gtccctggctcagcgtacccacagggtgtccatccagccttcataggagcgcaataccct
tactcagtaacaccgccctcactggcagctacagcagtgtcattccctggagtgcccgtc
ccatccatgacgcagattgcagtgcatccttatcacagcgagacaggaatgtcgttgtct
tccaatgtagcaagtaagttacagctctgggctgtgtgtagcataggaaatgtccatgca
ggatcaacgttcccagcgattcagggggcttccatgacaaccatgtcctcacagcccaac
tcccttgttacagggagttttcctgccgaggatgagcagcacagtcagcctgtgagcccc
caaggtctgcactacctccactctgcataccgagttgggatgctggctctggagatgctt
ggccgaagagctcacaacgaccaccccaacaacttctcccgcagcccaccctacacagag
gatgtaaaatggctcctcgggttagctgcaaagttaggtgtaaactatgtgcatcagttt
tgcgttggtgcagccaagggggtgctgagcccttttgtgctccaagagatcatcatggaa
gctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcaccccagccttccac
cagctggtgcagaggtgccagcaggcctatatgcaggtaatgnntcatcgtttgatccat
ctcactccagctgactatgatgactttgtgaatgccatccgcagcgccagaagcgccttc
tgcctgactcccatgggcatgatgcagttcaatgatattctccagaacctaaagcgcagc
aagcaaacgaaggagctgtggcaaagggtctctctggaaatgaccaccttctcgccgtga
DBGET
integrated database retrieval system
