Nestor notabilis (Kea): 104406154
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Entry
104406154 CDS
T08494
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104406154 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104406154 (MSH6)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104406154 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
WPP
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
104406154
NCBI-ProteinID:
XP_010013366
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSVKYLRPYKGSSDAEA
LKGGMFYSAKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEEMEMSESA
SGNSDDCDSEEDVKSNKRVMNSEGTVKTKRRRVLDSDSDHDGSDEEFKPDAKDTASSEEA
SSGVDENESTDVETDTESVAESPVKVPSKRKRRERNKPAKRSSLENERSETPKIAATASL
EVKSKLTSFAAPESFESQAAACSGGSSGFAAWEHEKLDWLQEGKKKDARRRGQNDPDYDP
CTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMK
GTWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARYKSMAHPTKFDKVVRREI
CRIITKGTQTYSIMDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSD
DRHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLISCIQEGLISGSQFWNASKTLK
VLLEEGYFKENENSENGCTLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCL
IDQELLSLANFEEYIPVDIDTAKTTRPSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTE
GTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKL
PDLERLLSKIHSIGSPLKSQTHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMSEIVDSM
EESASDFKSKVLKQLVTRKDKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDP
DYDKALQDIKAVEEELQKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESVVSRKLPEEYE
LKSSRKGFKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWHTAVECIA
VLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIV
IGSKDEDGSSEASCVLVTGPNMGGKSTLMRQAGLLAIMAQLGCYVPAEVCRLTPIDRVFT
RLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKEL
AEKIKCRTLFSTHYHSLVEDHAHNVAVRLGHMACMVENESEDPSQETITFLYKFTEGACP
KSYGFNAARLADIPEEVIQKGHRKAKEFERMTMSLRVFRYLCLVVDGAVRDGNAVQKLTT
MINHL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacaaccatccaactgaaagaacaatt
gtcagaggaaaagggaaatccactcgtgtccatgtacagttttttgatgacagccctaca
aggggctgggtcagtgtgaagtatctgaggccgtataaaggttcatcagatgcagaggca
ctgaagggtggtatgttctacagtgcaaagcctgaaattaaaagagcaatggtgctagca
gacgatgcaatgagtaaagataagactaagcggcttgaactggcagtatgcagtgaacct
tcagacacagaggaggaggaggaggaggaagaagaggaaatggagatgagtgaaagtgca
tcaggcaacagtgatgactgtgatagtgaggaggatgtgaagagtaataagcgagtaatg
aacagtgaaggtacagtaaaaaccaaaagaagaagagtgttggattctgacagtgatcat
gatggctctgatgaagagttcaagcctgatgcgaaagacacagcaagcagtgaggaagct
agtagtggggtggatgaaaatgaatcgactgatgtggagacagatacagagagcgttgca
gaaagtcccgtcaaagtcccttctaaacgaaagagaagagagagaaacaagcctgctaaa
aggagcagcttagaaaatgaacgttctgaaacacccaaaatagcagcaacggcttcttta
gaagtcaagtctaagctgacatcatttgcagcacctgagagctttgaatctcaagcagct
gcttgcagtggaggcagcagtggcttcgcagcatgggaacatgagaagcttgattggctg
caggaagggaaaaagaaagatgcgcgcaggagggggcagaatgaccctgattatgacccc
tgcactctgtatgtacctgaggactatctcaacaagtgcactccagggatgaggaggtgg
tggcagctgaaaagtcagaactttgatgctgtgatcttctacaaagttgggaagttctat
gagttgtatcacatggatgcggtcaccggcgtgaatgagctgggcctcatctttatgaag
ggtacttgggcgcattcagggtttccagaaactgcatttggcagattctctgatgttctg
gtgcagaagggctacaaggtagcccgtgtggagcaaacggaaactccagaaatgatggaa
gcgcgctacaagtcgatggcccacccgacgaagtttgacaaggttgtacgccgcgagatc
tgcagaatcatcaccaaaggaactcagacttacagcatcatggactgtgatccctccgag
aaccataacaagtacctgctgtgtgtgaaggagaaagaagactcttctgggcagcgtgtt
tatggggtctgctttgttgacacgtcggtggggaagttttatgttggccagttctcggat
gatcggcactgttcgaggtttaggactttagtagcacattacactcctgtgcaagtactg
tatgagaaggggaacctgtctgtggacacacagaagatactgaagggctcacttatttct
tgcattcaggaagggctgatctctggttcccagttctggaatgcatctaaaacactaaaa
gtccttctcgaagaagggtatttcaaggagaatgagaactctgaaaatggatgtactctg
ccctctgtaatcaaatctctgacttcagagagtgactctctgggattaactcctggggag
aacagtgaattagctttgtcagctctggggggatgtgtcttctatctcaaaaaatgcctg
attgatcaggagctgttatccctggcaaactttgaggagtatatccctgtggatattgac
actgcaaaaacgacgaggccaagtagtttctttgctaaaactgatcagcggatggtgctg
gatggggtcaccctgatgaacttggaagtcctgcagaacggaaccaatggaaccacagaa
ggtactttgttggagaggatcgattcctgttgtacgccatttgggaagcgcctcctgaag
cagtggctctgtgctccgctttgtaatccgaaatccatcaatgatcgtttggatgctgtt
gaggaccttctggcagtgccagataaaatgtctgaagttagtgagcacctgaagaaactt
cctgacctcgaaaggctgctcagcaaaattcacagcattggctcgccacttaaaagccag
acccatcccgacagcagggccatcttctacgaagagatcaaatacagcaagaaaaagatt
gctgacttcttgtctgcgctggaggggtttaaagtcatgagtgaaattgttgatagcatg
gaagaaagtgccagtgacttcaaatctaaagtcctgaagcagctggtcacccgcaaagac
aaaaacccagacggccgcttcccagacttgagtgctgagcttaaaaggtgggatactgct
tttgatcataaccaggctcgaaagacaggagtgattactccaaaggcaggttttgaccct
gattatgataaagcactacaagatattaaagccgttgaggaagaacttcagaagtacctg
gataagcaacgcaaactgcttggattcaaatccgtgctgtactggggggcaggcaaaaac
cggtaccagatggagataccggaaagcgtggtatcgcggaagctgcctgaggaatacgag
ttgaagtcaagcaggaagggatttaaacgttactggaccaaggagattgagaagatgctg
gctgcaatggttaatgctgaagagcgccgagacgcggcactgaaggactgtatgaggcgt
ttgttttacaactttgacaagaacagcaaggactggcacacggctgtggagtgcattgct
gtgttagatgtcttgatgtcccttgctaactacagtcaagatggtgatggaccactgtgc
cgacctgtaattctactgcctgtggatagtgctcctcccttcctggaacttaaaaattca
cgccatccatgcattacaaaaactttctttggggatgacttcattcctaatgacattgtg
ataggcagcaaagatgaagatggcagtagtgaagcttcctgtgtcttagtaactggcccg
aatatgggtggcaaatctacgctcatgagacaggctggtctcctggctataatggctcaa
ctgggatgctacgtacctgctgaggtctgcaggctgacaccgattgacagagtgttcacg
aggcttggtgcctcagacagaattatgtcaggtgaaagtaccttctttgttgaattgagt
gagacttccagcattctccagcatgcaacagagcactcccttgttcttgtggatgaactg
ggcagaggcacggctacttttgacggaacagctatagccagtgcagtagtgaaggagctt
gcagagaagatcaagtgccggaccctgttctccacacactaccattcactggtggaggac
cacgcacacaatgtggctgtgcgcctggggcacatggcatgtatggttgaaaacgagagt
gaggatccaagccaggagacaattacattcctgtacaagttcactgaaggagcatgtccg
aagagctatggcttcaatgcagcaagacttgctgatattccagaggaagttattcagaag
gggcacagaaaggcaaaggagtttgaaagaatgaccatgtcactgagggtattcaggtac
ctgtgcctggtagtggatggtgcagtgagggatggaaacgctgttcagaaacttaccact
atgatcaaccatctgtaa
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