Nestor notabilis (Kea): 104406208
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Entry
104406208 CDS
T08494
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104406208 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104406208 (MSH2)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104406208 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
DUF6437
Motif
Other DBs
NCBI-GeneID:
104406208
NCBI-ProteinID:
XP_010013428
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
VENHEFLVKASFDPNLTELREKMNELEEKMQSLLKSAAKELGLEAGKSIKLETNSQFGHH
FRITCKEEKVLRNNSKYEIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEII
NIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCI
EVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDAAEV
TIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGL
AWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVC
DQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSRESEGEPPAKKFCKEREEGENI
IQDFLCQVKALPLTDMSEDDIKIKLKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtggagaatcatgaatttctcgtcaaggcttcttttgatcctaatttgacagaattaaga
gagaagatgaatgaactggaagaaaaaatgcagtccttgttaaaaagtgcagcaaaagaa
ctaggtttggaagccggcaaaagtatcaaactggagacaaattcacagtttggacatcac
tttcgaataacttgcaaggaggaaaaagttctccgtaacaattcaaaatacgaaatagtt
gatacacagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgatgaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagaaccaatacagacgatgaatgatgtgatagcccaatta
gatgcaattgtcagttttgctcatgtgtcaaatggagcaccagtgccgtatgtccgtcct
gtcattctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcatc
gaagtacaagatgaggtggccttcatccccaatgacgttacgtttgagaagggcaagcag
atgttccacattattactggcccgaacatgggtggaaaatcaacctacatccgacagaca
ggggtgattgttcttatggcccagattgggtgttttgtaccatgtgatgctgcagaagta
accatcgtggattgtatcctggctcgggtgggagctggagacagtcagctgaaaggcgtg
tctactttcatggctgaaatgttagaaactgcttcaatcctgaggacagcatctgaaaac
tccctgataatcattgatgagctgggaagaggaacttctacctacgatggctttggctta
gcatgggctatttcagaatacattgctagcaaaatctgtgctttctgtatgtttgctaca
cattttcatgaactgacagctcttgctgaccaagtgccaacagtaaataacctacatgtt
accgctctgaccagtgacgacacgctgacgatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacatgtagcagagttggcggctttcccaaaacatgtgatagaa
agtgcaagagagaaagcattggaactggaggagtttcaaaacattggcaagtccagggaa
tctgaaggagaaccaccagccaagaaattctgcaaagaaagagaggaaggtgaaaatata
attcaggattttctttgtcaagtgaaagcattgcccctgacagatatgtcagaagacgac
atcaaaatcaagctgaaacaactgagaaatgatgtgttggcaaagaacaacagttttgtg
aatgaaataatttctcgaacaaaagttacatcatga
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