Nestor notabilis (Kea): 104406219
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Entry
104406219 CDS
T08494
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03013
Nucleocytoplasmic transport
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104406219 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104406219 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104406219 (THOC1)
03041 Spliceosome [BR:
nnt03041
]
104406219 (THOC1)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104406219 (THOC1)
Spliceosome [BR:
nnt03041
]
Complex C
Other components
EJC/TREX
104406219 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104406219 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
104406219
NCBI-ProteinID:
XP_010013440
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
TSTREALNIKSIKPLLNAFNQIPGSENEKKCTLDQAFRVIVEEEIINKAPCENLLAIISL
AISGVTEGICTASTPFVLLGDVLDCLPLDQCDRIFTFVEKNVATWKSNTFYSAGKNYLLR
MCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEHESTL
GQKHSEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWK
TFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFR
RHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQLLSENPPDGERFSKMV
EHILNTEENWNSWKNEGCPSFVKERSQPEFQLGPPDSKPMRPVRKRPAPEDFLGKGPNKK
ILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVENKYKAVNNS
NYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEED
NDALLKENNESPEVQRDKAMTGDQIESVANRLGEQWKVLAPYLEMKDADMRQIESDSEDM
TMRAKQLLVAWQDQEGAHATPENLVLALNKAGLGDLAESLSNDTESGS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
acatccaccagagaggccctgaatatcaaaagtatcaagccattattgaacgcatttaac
cagattcccgggagtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttatt
gtagaagaagaaataataaacaaagctccatgtgaaaatctcctggcaattatttctctt
gctattagtggagtcacagaaggtatctgcactgcatcaaccccttttgtgcttctgggg
gatgttctggattgtctgcccttggatcagtgtgacagaattttcacttttgtggagaaa
aatgttgctacatggaaatctaatacattttactctgcagggaagaactacttgctacgg
atgtgcaatgacctcctgagaagattatctaagtcacaaaacacagtcttctgtgggaga
attcagctgttcttggctaggttatttccgctttcagaaaagtcaggacttaacctgcag
agccagtttaatctggaaaatgtcactgtcttcaatacgaatgaacatgagagcactcta
ggacagaagcactccgaggagagagaagaaggaatggacgtagaagaaggtgaaatggga
gatgatgaagcaccaacaagctgttccattccaatagattataacctgtatagaaaattc
tggtcacttcaagattattttagaaatcctgtgcagtgctatgagaaggtctcatggaaa
acttttcttaagtactcggaagaagttttggctgttttcaaaagttacaaactggatgac
actcaggcttcccgaaaaaagttggaagaactaaaaacaggaggagaacatgtatatttt
gcaaagttcttaactagtgaaaagctgatggatttacagctgagtgacagtaacttccgc
cgtcacatcttgttgcagtacctaatactatttcagtatctgaaaggacaggtcaaattt
aaaagttcaaactatgttcttacagatgaacagtcactttggattgaagatactacaaaa
gcagtttaccagcttctttcagaaaatcctccagacggggaaagattctcaaagatggta
gagcatatattaaatactgaagaaaactggaactcatggaaaaatgagggctgcccaagc
tttgtgaaagaaagatctcagccagagtttcagcttggacctcctgattctaagccaatg
aggcctgtgagaaagaggccagctccagaggacttcttaggaaaaggaccaaataaaaaa
atccttatggggaatgaggaactgacccgcctttggaatttatgtcctgataacatggaa
gcttgtaaatcggagagcagggaatatatgccaacattggaggaattttttgaagaagct
attgaacaagcagaccctgaaaacatggttgaaaataagtataaggctgtgaacaattct
aactatggctggagagcactaaggcttctagcacgcagaagtccccacttcttccagcca
acaaaccagcaattcaagagtttacctgaatatctagaaaacatggtaatcaaattagcc
aaggagctgcctcctccttctgaagaaataaaaacaggcgaggatgaagatgaggaagat
aatgatgctttattaaaggaaaacaatgaaagtccagaggtgcaacgggacaaagccatg
acaggcgatcagatcgagtcagttgcgaacaggcttggggagcagtggaaggtcctggcc
ccctacttggaaatgaaggatgccgacatgcggcagatcgagtcggacagtgaggacatg
acgatgagagccaagcagctgctggtcgcctggcaggaccaggagggcgcccatgccacc
cccgagaacctggttctggcgctgaacaaagccgggttaggtgaccttgcggaaagcctg
agcaatgacaccgagagtggcagctaa
DBGET
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