Nestor notabilis (Kea): 104406460
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Entry
104406460 CDS
T08494
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03013
Nucleocytoplasmic transport
nnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104406460 (UPF2)
03015 mRNA surveillance pathway
104406460 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104406460 (UPF2)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104406460 (UPF2)
mRNA cycle factors
P-body specific factors
104406460 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104406460
NCBI-ProteinID:
XP_010013733
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPPNMEEKESPLNNKEKEFTERRPVSTREKPKEDVKVGMKRETLKVPDDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPAPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDTEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAVRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagcccccaaatatggaagaaaaagaatctcccttaaataat
aaagaaaaagaatttacagaaaggcggccagtgagcaccagggagaagccaaaagaagat
gtcaaggttggcatgaagagagagactctaaaggttcctgatgacaaaaagaaaaagctg
gaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaggaagaacaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaggaagaagcagctgctcaactg
aaagaaaaagaggaagcccatcagctccatcaggaggcttgggagcgccatcaggcgagg
aaagagcttcgcagcaaaaaccagaatgcaccagacaaccgccctgaggagaacttcttt
agcagactggattccagcctgaagaagaacacagcttttgttaagaagctcaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gccgtgcacctgtgttccctctttcaccagcgctatgctgattttgctccttctttactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaaaactcccaacattaccaag
ttaagaactgatctgcgattcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtccttgatctatgagcagcttaaaaacattattaacgctgatcgagaatcc
cacactcacgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaagtcaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcatccttcactccaaaggagagctgagtgaagatcgacacaagcagtatgaggag
tttgcaatgtcgtatcagaagctgttggcaaactctcagtctctggctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccagcacctgaggaacatggacctggcatt
gatattttcacaccaggaaagcctggagaatatgacttggaggggggtatctgggaagat
gaagatgccagaaacttctatgagaatctcatcgacttaaaggcttttgtaccagcaatt
ttgtttaaggataatgaaaaatgttcccagaacaaggattctggcaaagatgaatcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcccctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcagcttccaaactgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactcgtacgagcacttttcatagttcctaggcaaaggttggatttgctaccgttt
tacgcaaggctggttgccacattgcatccctgtatgtctgatgtagcagaggatctttgt
tccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagattcattggtgagcttaccaagtttaagatgttctccaaa
aacgatactctccactgcttaaagatgcttctgtcagacttttctcatcaccatattgaa
atggcatgtactctgctggaaacctgtggaagattcctcttcagatcaccagaatctcac
ttaagaaccagtgttcttctggaacaaatgatgagaaagaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaacccccctccagctgaa
aaaactgtgaagaaaaagcgtcctcctttgcaggagtatattcgtaagctcctttacaag
gatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagttgccttggcag
gacacagaagtaaaggactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtcctttatcaggaagatgtt
ggaattcatgtggtggatggagtgctagaggatattcgactaggaatggaggtgaaccag
ccaaagtttaaccagcggcggatcagcagtgccaagttcttgggggagctttataattac
cgaatggtggaatcagctgtaatatttcgaactctctattctttcacatcatttggtgtg
aaccctgatggtagtcctagtccactggaccctccagagcatcttttcagaatcagacta
gtgtgtactatcctcgatacctgtgggcagtattttgacagaggatccagcaaacgaaaa
cttgattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagtctggatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgtaattctctggaagaagctgtcagacaggtgcaa
gacttggaaagagaattcttaataaaattaggaattgtgaatgacaaagattccaaagac
tccattacggaaggagagaatctggaagaggatgaagaggaggaagaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctca
gacaatgaggaagaagaaggtgaagaagaggaggaagagaacacggattatcttacagac
tccaataaggaaaatgaaactgatgaggagaatacagaggtaatgattaaaggaggagga
cttaagcatgtcccttgtgcagaagatgaggacttcattcaagcattggataaaatgatg
ctggaaaatcttcagcaacggagtggagaatctgttaaggtacatcagctggatgttgcc
attcctctccatctgaaaagtcagctcaagaagggtcccccacttggaggtggggaagga
gaatcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaagcag
cagtttaagatcctaaatgtaccaatgtcttctcaactcgctgcaaaccactggaaccaa
cagcaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaatgag
cgtcaagaacaagaggactaccaggaaatgttgcagtctctggcccagcgtccagctcca
gcaaatactaatcgtgaacggcggcctcggtaccagcatccgaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
