Nestor notabilis (Kea): 104407114
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Entry
104407114 CDS
T08494
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104407114 (HELZ)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104407114 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104407114 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104407114
NCBI-ProteinID:
XP_010014604
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MADRRPEKACEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWHFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQNRNGKSENTAGPEITKIRTPEKKPLESKQVDLEANSQNRSPES
RSGVGYPNAKFHRKENLNPRQLNLHLTPPHSQYAVPNRHFQHLAQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRMHG
NVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANW
KLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALP
SPSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQPD
GSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLASRAVSAS
SLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYSS
PELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYSVL
QHLGQFPPLMPNKQIVESNSNSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPLS
LFQELSLGSSSGSNGFYSYFK
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaaatatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcacttccgccctccaccccggggagtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaggggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctgacagaatggcagaaacgatacgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacagtgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcacaaccaaaaagtctcatcagacgtgg
acatttgctctcacttgcaagcctgcaagaatgctgtatcgagtggcattgctgtatgat
gcccatcgcccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaatgga
atagatcattatatatacaaagtcagtatagcatttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgactttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctgtctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctccat
gacctcctttatattgaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagatcgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtac
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagatact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaagag
aaaacaaaagattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgctttggacaggattaaggacaacagtattttatttccagatgtcagc
atgactcccaccatcccctggagtcccaacagacaatgggatgagcagttggaccctcga
ttaaacgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaaagagtagtagtcgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagacgaagctgcacaagctatggag
tgtgaaactattatgcctctagcattagctaataaaaatacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggagagaaaccttcat
gtctcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattacacatctgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagctcataaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaacaat
gcagaggtgtttgaagtagtggagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaagttggacgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgagctgcggaaaaaaagactgtctgatgtcagtgtggagagagtgcta
aacgttcagggaaaacagttcagagtcttgtttctcagcacagtacgaacacggcatacg
tgcaaacataagcagacaccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttgtgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagctggaagctttggagttaaagaaaacttacgtgttgaac
ccactggctcccgaatttatcccacgagctcttcggcatcagcattcagccaataccacc
aaacagcagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaattgttcagcccaatccttctgttcttatcggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctataccttatggcctgggacatcattcaccagttagc
ataggacagcagcagcaacttcagcatcaagacaaggagcaacatgaacaaaatcgaaac
ggtaaaagtgaaaacactgctggacctgaaatcactaaaattcgaacacctgagaagaaa
cctctggaatccaagcaggttgatttagaagcaaattctcagaatagaagcccagagtct
cgttccggtgttggttatcccaatgctaaattccatcgcaaagagaaccttaaccccagg
cagctgaacctccatctcaccccaccccactcacagtacgcagttcccaaccgccacttc
cagcacctggcacagatcccaaggcagccatatcctctgcagcagcagcaaaacctttta
agtcaacaacaaaatcatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcccct
gcttaccaggcaggccccagccaatctttttttaataatcccattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaagtc
aataatcctttgagacctattgcccagcacaaccctgttctgccaacccatttgaacaac
ttcattgaagagaatccatcaggaatgcccttaggggacactttagatcgtatgcatgga
aatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaa
cataatgcctatctcagtcaaggcactattccatatcagcaccatcaccatcctcatcta
ccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactgg
aaacttgccagtaatacagaagatgaaacagaggcaacatattcaagattccaggatttg
ctcagagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatgccaccc
cctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactccct
tctccttcctgcaactctaaccacagcggtcacttccctaacttcactgaaaacaacaga
gacattgaaatacccagtaacccagcatttcagcagcatttaccccaaatatacaatccc
cctttctcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacctgat
ggatcgtggacttatgctaacctacaacagaatcaccttatggggcagggctttcattat
ggtatacctccattgccccataggtcgcaacaaaacccttttatacagatacagaatcat
cagcatgcagtcggtcaggagccatttcatccactcgcatctcgagcagtatctgcttct
tcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaaga
agaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagt
cttggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactattcatca
cctgagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaacgga
gccaacagagcagttccaccccgggagttgttagctccaccgaagacggtcaagccccca
gaggaacacctgaaggccgagaacatacaactatccaactccttcaactacagcgtgcta
caacatctcggccagtttccacctctcatgcccaacaagcagatcgtcgagtcgaacagc
aacagccagcagaacgctggtgggagcaagcctgtcatgtcctacgcaagtgctctgcgg
gctccgccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttgtct
ttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctatttt
aaataa
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integrated database retrieval system
