Nestor notabilis (Kea): 104407118
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Entry
104407118 CDS
T08494
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104407118 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104407118 (CNOT6)
Enzymes [BR:
nnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104407118 (CNOT6)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104407118 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104407118 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104407118
NCBI-ProteinID:
XP_010014607
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaattatgtcctcagaggaagcagccaacggaaagaaatcacactgggcagag
ttggaaataagtgggaaagtgagaagcctaagttcgtcattgtggacactgacccatttg
acagctttgcatctcagtgacaattccttatcccgtattccttcagacattgccaagctt
cacaatctggtatatctggacctgtcctctaataaaattcgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
tttgagctggggaaactgttccagttacagaccttgggtctgaaaggaaatccacttaca
caggatattctgaacctttatcaggaaccagatgggacgcgaaggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaactgaacaaccacctccaagatct
tggattatgttgcaagaaccagaccgtacaagaccaacagccttgttctctgtcatgtgt
tacaacgtactctgtgataaatatgctacccggcagctgtatggctattgtccttcttgg
gccttgaactgggagtacagaaaaaaagccattatgcaggaaatcctgagctgcaatgct
gacatcataagtcttcaggaggttgaaacagagcagtactacagttttttcctggtggaa
ttgaaagaacgtggctacaatggattcttcagtccaaaatccagagctaggacaatgtct
gaacaggaaagaaaacatgttgatggttgtgcaatatttttcaaaacagaaaaatttact
ttggttcaaaaacatactgttgagttcaatcaactagcaatggcaaactcagaaggttca
gaagctatgctgaacagagttatgacaaaagataacattggagttgctgtattgttagaa
ctgcggaaggaattgatagaaatgtcatctggaaagccacaccttgggatggaaaagcag
ctagtgcttgtagctaatgcacatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtccgaggtaaagaacattattgataaagcttctcgtagt
ctcaaacctggtgtttcgggagagcttggaaccattccacttgtactgtgtgcagatctc
aattccctaccagactctggtgttgttgagtacttgagcactggtggagtggaaacaaac
cacaaagattttaaggaactgagatacaatgaaagtcttactaacttcagctgcaatgga
aaaaatggaacaacaaatggaagaattacacatggtttcaagttgaagagtgcctatgag
aatggtctaatgccttatacaaattacacatttgacttcaagggtattattgactacatc
ttctactctaaacctcagctaaacatacttggcattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccactcatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaatggaatccatctc
cctggcaggaggtag
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