Nestor notabilis (Kea): 104408100
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Entry
104408100 CDS
T08494
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03030
DNA replication
nnt03410
Base excision repair
nnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104408100 (POLE)
03410 Base excision repair
104408100 (POLE)
03420 Nucleotide excision repair
104408100 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnt03032
]
104408100 (POLE)
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104408100 (POLE)
Enzymes [BR:
nnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104408100 (POLE)
DNA replication proteins [BR:
nnt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104408100 (POLE)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104408100 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
104408100
NCBI-ProteinID:
XP_010015887
LinkDB
All DBs
Position
Unknown
AA seq
2184 aa
AA seq
DB search
VALPYKPYFYIATQKGYEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKL
SFNTVDDLVKVRKEISPVVRKNREQDHASDVYTAMLSSALSGGILSTDEEGASRKVANQM
DNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSTYPPEITCRDDLVERPDPVVLAFD
IETTKLPLKFPDAEADQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGQFCVF
NEPDEAHLIQRWFEHIQETKPNIIVTYNGDFFDWPFVEARAAVHGINMYQEIGFQKDSQG
EYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTL
ATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCETLLMVQAYHANII
FPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLVQHVE
KTLRHAIEDEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNII
LTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKF
PALAPDAAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYV
DTVRAFRDRRYEFKGLHKVWKKKLSSAVEAGDASEVKRCKNMEILYDSLQLAHKCILNSF
YGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPEN
FVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYTTRSENSIFFEVDG
PYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLK
GSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSIS
TAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLK
SPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKN
DVYKQKKINELFTLEGKRQVLTSQPPKGTPSSQIGDIEDFGAAKTRQPTVPIANKRKRVP
AAEESQHMSQYLELSQSWREILGPPPPLGTTKEQRLVWLRYHQKKWEVQARXRRRLEDSG
EAVAGGGVRQALAKGLGSYLRRAARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIR
LSIPRVFYVNQRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEGMYQEHINEINADLS
APDIEGVYETQVPLLLRALIQLGCVCMVSRQLVGHLAGREAETFDIEHLEMRSLAQFTYL
EPGSIRHIYLYHSSQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTILFSAERSALLE
KVGEELLPPDKHTFEVRADTDPKAIHRAIQRLLLGYKDERRGPTLVAVQSNWDLKRLVSA
IPIIEEFPLVPIQLVDDISYSVLDWQRHAARRMIRQYLNLDTCLSQAFEMSRYYHIPIGN
LPSDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNP
GCYSTVCLELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASLEDMVTGNQAANIP
ASYDETALCSNTFRILKSMVVSWVKEITQYRNVYADNQVIHFYRWLRSPSSLLYDPALHR
TLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEI
FHSLTISFSRCWEFLLWMDPANYGGIKGKVDSRIHYGEKDTRKRQVLEEEEDSEEEEEAV
GEEEEEGELNVEELLENSWNIAQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSVPG
STPVKRRSTSQMPQEALGEMGPMPGVIIFSQDYVANELTQSFFTITQKIQKKMAGSRNAT
EPSEMFPVLPGSYLPLNNPALEFIKYVCKVLSLDANIISQVNKLRRDLLRLIEVGEFSEA
AQFQDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSVLPGWVCSNCQVQYDSDAIEA
ALVEALQKKLMAFVLQDLVCKKCHGVKESHMPVYCSCAGDFALTISSQTFMDHVKVFQNI
ARHYSMAYLLETIEWLLCTNPQLQ
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgccctacaagccttacttctacatcgccactcagaagggctatgagcgagaa
gtgtcctccttcctctccaagaagttccaagggaagattgcaaagcttgaaactgtcccc
aaagaagacttggacctgccaaaccacttggtgggcctgaagaggaactacatcaagctg
tccttcaacacggtggatgatttggtgaaggtgcggaaggagatctctcctgtcgtgagg
aaaaacagagagcaggaccatgcgagcgatgtctacacggccatgctatcaagtgctctg
agtggaggcatcctgagcacggatgaggaaggagcctccaggaaggtagccaaccagatg
gacaacattgtggatatgcgggagtatgatgtcccctaccacattcgcctctccattgac
ctgaagatccatgtggctcactggtacaacgtgcggtaccgaggcagcacctacccccct
gaaatcacctgccgggatgacctcgtggagcgcccagatcctgtcgttcttgcctttgac
attgaaactacgaaactccctttgaagtttcctgatgcagaggcagaccagatcatgatg
atctcctacatgattgatgggcagggctacctgatcacaaacagggaaatcgtctctgag
gatattgaagactttgagtttactcccaagccggagtatgagggtcaattctgtgtcttt
aatgaaccagatgaagctcacttaatccagagatggtttgaacatatccaggagaccaaa
ccaaacatcattgtcacgtacaatggagacttctttgactggccttttgtggaagcaaga
gcagcagttcatggaattaatatgtatcaggaaattgggttccagaaggacagccaggga
gagtacaaagcatcccagtgcatccacatggactgtctaaggtgggtgaagagggacagt
tacctcccagtgggaagtcacaacctgaaggcagcagctaaagcaaaactgggttatgat
ccagtggagctggaccctgaagagatgtgccggatggctacggaggagcctcagaccctg
gccacctattcagtgtccgatgcagttgctacctattacatgtatatgaagtacgtgcat
cctttcatttttgccttgtgcaccatcatccccatggagcctgatgaggtgttaagaaaa
ggatctgggacgctgtgcgagacactgctgatggttcaggcctatcatgccaacatcatc
ttccccaacaagcaggagcaggaattcaacaaacttacagaagatggccatgtgttggac
tcggagacatacgtgggaggccacgtggaagctctggagtcaggggtcttccgcagtgac
atcccctgccgcttcagaatgaatcctgctgccttcgacttcctggtgcagcatgtggag
aagacgctgcggcacgccattgaggatgaggagggtctgccactggatcaagttaccaac
ttccaggaggtttgtgatgaaatcaaggtcaaactgaattccctgaaggatgttccaaac
agaattgagtgtccccttatctaccatctagacgtgggggccatgtaccccaacatcatt
ctgaccaacaggttgcagccctcggctatggtggatgaggccacgtgtgctgcctgtgac
ttcaacaagccgggtgccaactgccagcgccggatgacttggcagtggagaggagagttc
atgcctgccagccgcagtgaataccaccgcatccagcagcagctggagtcagagaagttc
cctgccctggcccccgacgcagcaccccgcgccttccatgagctctcccgggaggaacag
gccaagtatgagaagaagcggttggcagattactgccgcaaggcatacaagaagatccat
gtcaccaaggtggaggaacgagtcaccaccatctgccagcgagagaactctttctatgtg
gacacagtgcgagctttcagggaccgccgctacgagttcaaggggctgcacaaggtgtgg
aagaagaagctgtcctcagcagtggaggcaggagatgcctctgaagtgaagcgctgcaag
aacatggaaatcctgtatgactccctgcagctggcccacaagtgcatcctcaactctttc
tatggctacgtcatgcggaagggagctcgctggtactccatggaaatggctggcatcgtc
tgcttcacgggagcaaatatcatcacccaggccagggaactgattgagcagattgggaga
cctctggaactggataccgatgggatttggtgtgtcctccccaacagcttcccagagaac
tttgtcatcaagtcaaccaatgccaagaaaccaaaggtgacaatctcctacccaggtgcc
atgctgaacatcctggtgaaggaaggcttcacaaatgatcagtaccaggagctgcaggac
ccggcctccctcacctacaccacacgttcagagaacagcatcttttttgaagtggatggg
ccgtacctggccatgatcctccctgcatccaaggaggagggcaagaagctgaagaaaagg
tatgcagtgttcaatgaggatgggtccttggctgagctgaaggggtttgaagtgaagcgc
cggggagagctgcagctggtgaagatattccaatcttcggtgtttgaagcatttctgaag
ggcagcaccctggaggaggtctatgcttctgtggccaaggtggcagattactggctggat
gtgctctacagcaaggctgccaacatgcctgattcagagctgtttgagctgatctctgag
aatcggtccatgtcacgcaagctggaggactacggggagcagaagtctacgtccatcagc
actgccaagcgcctggcagagttcctgggggaccagatggtgaaggatgcagggctgagc
tgccggttcatcatttccaagaaaccagaagggtctccagtcacagagagggccatccct
cttgccatcttccaagctgagcccagtgtgcgcaaacactacctccgaaagtggctgaag
agcccgtcactgcaggacttcaacatccgtgcgatcctggactgggactactacattgaa
agactgggaagcactatccagaaaatcatcaccattcccgcagccctgcagcaggtaaag
aacccggtgccacgggtccggcacccagactggctccacaagaaactcctggagaagaat
gatgtgtacaaacagaaaaaaatcaatgagctcttcactttggaaggcaagagacaggtc
ctcaccagccagcccccaaaggggacgcccagctcacagattggtgacatagaggatttt
ggggctgccaagacccgtcagccaacagttcctattgcaaacaagcggaagcgagtccct
gcggcagaggaaagccaacatatgtcccagtaccttgagctatcgcagtcctggcgagag
atcctgggtccaccaccacccttgggcaccaccaaggagcagcgcctggtctggctgcgc
taccaccagaagaagtgggaggtgcaggcacggnagaggcggcgcctggaggacagtggg
gaggcagtggcaggaggaggtgtccgccaggccctcgccaaagggctgggcagttacttg
cgccgggcagcgcgcagcatcttggacctgccctggcagatcgtgcagattgctgagacc
agccagcctggactgttcaggctgtgggcagtgattggaagtgacctgcactgcatcagg
ctgagcattccccgggtcttctatgtcaaccagcgtgtcccaaagccggaggagggagca
gcctacaggaaggtgaacaggatcctgccccgctcaaacttggtttacaacctgtatgaa
tactcagtccctgaaggcatgtaccaagagcacatcaatgaaatcaatgcggacctctct
gctccggacattgagggggtatatgagacacaggtgccgctgctcctccgtgccttgatc
caactgggctgtgtgtgcatggtcagcagacagcttgtcgggcacctggcagggcgggag
gctgaaacctttgacatcgagcacctagagatgcgctcactggcccagttcacatacctg
gagccaggaagcatccgccacatctacctctaccacagctcccagggcagcaaggcgctc
ttgggcctctttatcccttcacagcgcaaagctgctgtctttgtgctggacaaggtccgc
agcaaccagatgccaaatctcaccatcctcttctcggcggaacgcagtgcgctgctggag
aaggtgggtgaagagctactgcccccagacaagcacacctttgaagtgcgtgctgacacc
gaccccaaggccatccatagagccatccagcggctgctgctgggctacaaggatgagcgc
cgaggccccacgcttgtggctgtgcagtctaattgggacctgaaacggctggtgagcgcg
atccccatcattgaagagttccccttggtccccatccagctggtagatgacatcagctac
tcggttctggactggcagcgccacgccgcccgccgcatgatccgccagtacctcaacctg
gacacgtgcctctcccaggcatttgagatgagcaggtactaccacatccccattgggaac
ctccccagtgacatctccacctttggctctgacctgttcttctcccgccacctccgtcgt
cacaaccacttgctctggctctcgcccacagcccgcccagacctggggggtaaggaggct
gatgacaaccgcctagtcatggagtttgatgagagagcctctgtggagatcaacaaccct
ggttgctactccacagtgtgtctggagctggacatccagagcctggctgtaaacacggtg
ttgcagtcccaccacataaacgacatggaaggaggctccagcatgagcatcagctttgac
gtgattcagcaggcatccctagaagacatggtgacagggaaccaagctgccaacatcccg
gccagctatgacgaaactgccctctgctccaacactttcaggatcctgaagagcatggtg
gtgagctgggtgaaggagatcacgcagtatcgcaacgtctacgcagacaaccaggtcatt
cacttctaccgctggctccgctctccttcctccctgctctatgacccggctctgcaccgc
acgctccacaacatgatgaagaagctttttctgcagctggtggcagagttcaagcgtttg
ggctcctcggtggtttatgccaacttcaaccggatcattctgtgcaccaagaagcggcgc
atcgaggacgccatcagctacatggagtacatcatcaacagtatccactccaaggagatc
ttccactctctgaccatctccttctcccgctgctgggagttcctgctctggatggatcca
gcaaattatggaggtattaagggaaaagtggattctcgcatccactacggggagaaggac
accagaaagaggcaagtgttggaggaggaggaggacagcgaggaggaggaagaggcagtg
ggggaagaagaggaggaaggggagctgaatgtggaggagctgctggagaacagctggaac
attgcacagttcctgcctcaggccgcctcctgccagagttacttcctgatgatcgtgtcg
gcctacattgtggccgtgtaccacagcatgaaggaggagctgcggcgcagtgtccctggg
agcacccctgtcaagaggaggagcaccagccagatgccccaggaggcactgggggagatg
gggcccatgcccggcgtgatcatcttctcacaggattatgtggccaatgagctcacccag
agcttcttcaccatcacccagaagatccagaagaagatggctggttctcgaaatgccacc
gagccttcggaaatgttcccagtgctgcctggctcctacttgccactcaacaacccagct
ctggagttcatcaaatatgtttgcaaggtcctctctctggatgccaacataatcagccag
gtgaacaaactgcgccgggacctgctgcgcctcattgaggtgggcgagttctcagaagct
gcccagttccaggacccttgccgctcctatgtgctccctgaagtcatctgcaggaactgt
aacttctgcagggacctggacctgtgcaaggaccctgcactctcccaggatgggtcagtg
ctgcctggctgggtctgctccaactgccaggtgcagtacgactctgatgccatcgaagca
gcactggtggaagccctgcagaagaagctgatggccttcgtgctgcaggacctggtgtgc
aagaagtgccatggcgtgaaggagagtcacatgccagtgtattgcagctgtgctggagac
tttgccctcaccatctcctcccagacctttatggaccatgtcaaagtcttccagaacatc
gcccggcactacagcatggcctatctgctggagacgatcgagtggctgctgtgcaccaat
ccccagctccagtaa
DBGET
integrated database retrieval system
