Nestor notabilis (Kea): 104408287
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Entry
104408287 CDS
T08494
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03410
Base excision repair
nnt04140
Autophagy - animal
nnt04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104408287 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104408287 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
104408287 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnt03036
]
104408287 (HMGB1)
03400 DNA repair and recombination proteins [BR:
nnt03400
]
104408287 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nnt04147
]
104408287 (HMGB1)
Chromosome and associated proteins [BR:
nnt03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
104408287 (HMGB1)
DNA repair and recombination proteins [BR:
nnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104408287 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
104408287 (HMGB1)
Exosome [BR:
nnt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104408287 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
104408287
NCBI-ProteinID:
XP_010016143
UniProt:
A0A091RPB0
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcgatcctaagaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaagtgctcagaacggtggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaagggggaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggatgttgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttacgaaaaaaaggctgcaaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaggacgaagaggatgaagatgat
gaagaagaggaagaggaggaggacgaagacgatgatgatgatgaataa
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