Nestor notabilis (Kea): 104408328
Help
Entry
104408328 CDS
T08494
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nnt04515
]
104408328
Cell adhesion molecules [BR:
nnt04515
]
Cadherins
Cadherin related
104408328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Cadherin_CELSR2_9th
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
hEGF
EGF_TEN
EGF_CA
Cadherin_4
EGF_3
EGF_2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
104408328
NCBI-ProteinID:
XP_010016190
LinkDB
All DBs
Position
Unknown
AA seq
3031 aa
AA seq
DB search
SLVAGILATXINGEITYTVNEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYILTVRAEDG
GGQFTTIRVYFNILDINDNPPVFSMTSYSTSLMENLSPGSAILNFSVTDADDGSNSQLSF
SIASGDSAGQFGIDHSGVLSIRQPLDRESQSFYSLVVQVHDMAPLPASRYTSTAQVSIIL
LDVNDSPPSFISPKLTYVPENTPIDTVVFKAQATDPDSGPNSYIEYSLLWPLGNKFSIGT
IDGEVRLTGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKV
EVGENTLTGTDLIQVFATDGDEGTNGQVRYAIVSGDASNEFRIDSVTGVITVAKPLDRER
KPSYTLTVQSSDRGSSPRTDTTTVSIILKDVNDYIPTFELSPYSVNVPENLETLPKVILQ
VVARDDDQGLNSKLTYVLVAGNEEGAFTLSSSGELRLVQSLDREAKEQYMLLITAADAGS
PALTGTGTIAVTVDDVNDNVPTFAFNVYSATVPEDAPTGTDILLVNSSDADASTNAVISY
RLTGGNSQFTINPSTGQIITSALLDREARENYTLVVVASDGGFPRALSSSTSVLVSVADV
NDNPPKFQHHPYVTHVPSPTTSGSFVFAVTVTDADAGSNAELHYSLVGKNSEKFHIDPAR
GAILAANPLAGESEVTISVHVRDGGRYPKTDSTTVTVRFVNRAEFPRVQADQETITFPEN
QAVGTLVTTISGSSARGGSLSYYIASGNLGSTFLVDQVTGQLSVGRALDFEAIQKYVIWV
EARDTGFPPFSSYKKLEVMVMDVNDNAPEFEQDPFIAEIVENLSPRKILTVAAVDRDSGL
NGQLNYEIIGGNTENSFSINRATGEIRSVRPLDREKLSQYTLTIKASDKGTPLQSTTVKV
IINILDENDNAPRFSQIFSASVPENAPLGFTVTRVTTSDEDIGVNAVSRYSIRDTSLPFT
INPSTGDITISRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFTKPSYYL
ECPELPGIGLKVTQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQYLRYQNSS
GSSNVNINRHSFIVTSSDRGSPPLISETTVTVNIVDSNDNAPLFLAQKYXXXXXXXXXXX
VRIGTNLIKVTAVDDKDFGLNSEVEYFISDESKTNKFRLDRSTGWISVSSSLMADLNKNF
LFKVEAKDKGNPPLSSEVAVEIVVTEENYHTPEFSQSRMSVTIPESHSVGTVVRMVSARD
RDAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELCQKHELVVTATDGGWVSRT
GYCSVTVNVIDVNDNSPAFSPEDYFPNVLENAPSGTTVICLNATDADSGSNAVIAYAIQS
SDSDLFVIDPNTGTITTQGFLDYETKQSYHLTVKAFNVPDEERCSFASVNIQLEGTNEYV
PRFVSKLYYFEVSEAASKGTVVGEVFASDRDMGTDGEVHYLIFGSSRKKGFQIDEKSGQI
CVSGPLDREKEERISLKVLAKNLGSIRGADIDEVTVNITILDANDPPVFTLGAYNIRISE
GVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNDNSAFSINPQTGQVTVTAELDRETLPV
YNLSVLAIDSGTPSATGSASLLVTLEDINDNGPTLSTSQGEVMENNRAGTLVMTLQSSDP
DLPPNQGPFTYYLLSTGPATSYFSLSTTGVLTTTREIDREQISDFYLSVITRDSGIPQMS
STGTVQIKVIDQNDNPSQPRTVEIFVHYYGNLFPGGILGNVKPQDPDVLDSFQCSLTSGV
TSLFSIPGGTCELHSQARSTDGTFDLAVLSNDGLHSAVTSSIRIFFTGFGNATIDNSILL
RLSAHSMWDFLTNHYLQFLRIASSQLTGLGTAIQLYGLYEESNHTFLMAAVKRGNNQYVN
PSGVATFFESIKDVLFRQSGVRIEAVDHDWCLQNPCQNGGSCLRRLAVSPALKSHESVPV
IIVANEPLRPFVCRCMPGYDGSLCETDIDECLPSPCHNDGTCHNLVGGFSCSCPEGFTGM
ACERDVNECLSNPCKNGAACQNFPGSFNCVCKTGYTGKTCDSTVNYCECNPCFNGGSCQS
GVEGYYCHCPFGVFGNHCELNSYGFEELSYMEFPSMDPNNNYIYIKFATIKSNALMLYNY
DNQTGERAEFLALEIAEGRLRFSYNLGSGTYKLTTTKKVSDGQFHTVIARRAGMAASLTV
DSCSEDQEPGYCTVSNVAVSTDWTLDVQPNRVTVGGIRSIEPILQRRGQVESHDFVGCIM
EFAVNGRPLEPSQALAAQGILDQCPRLEGACTTSPCQHGGTCVDHWSWQQCHCRDGLTGK
HCEKHVTADTALSLEGKGRLDYHMSPNKRREYMMRHGTRGAGPGPPNVDRLEVKFRTRSE
NGVLVHVQESSNFTTVKIKGGKVHYISDAGIAGKVERNIPEIYTADGQWHSVLIEKNGSA
TILSVDKTHSRDILHATQDFGGLNVLTISLGGIPSSQPFKSTVAGFDGCISYIKYGWESL
PFTGRHSLATLSKTDPSVKIGCRGPNVCASSPCWGELMCINRWYAYQCVPPGACASNPCQ
NGGSCEPGLHAGFTCSCPEAYAGRTCEAVVACLGVLCAPGHECRAGINGGHICLPAPHPT
ELSLPLWAVPAIVGSCATVLALLVLSLILCNQCRGKKSKGPKEEKKKEKKKKGSENVAFD
DPDNIPPYGDDMTVRKQPEGNPKPDIIERENPYLIYDETDIPHATETIPSAPLASPEPEI
EHYDIDNASSIAPSDADIIQHYKQFRSHTPKFSIQRHSPLGFARQSPMPLGASSLTYQPA
YGQSLRTTSLSHSACPTPNPLSRHSPAPFSKSSTFYRHSPARELHLAIREGSPLEMHNDV
CQPGIFNYSTRLGRRSKSPQTMASHGSRPGSRLKQPIGQIPLETAPPVGLSIEEVERLNT
PRPRNPSICSADHGRSSSEEDCRRPLSRTRNPADGIPAPESSSDSDSHESFTCSEMEYDR
DKPIAYTSRMPKLSQVNESDADDEDNYGARL
NT seq
9095 nt
NT seq
+upstream
nt +downstream
nt
gttccttagtggcaggcattctagccactngaatcaatggggagatcacgtacacagtaa
atgaagatgatgaagagggtatcttcttcctgaaccccgttactggagtcttcaacctga
cccgtgcactggactacgaagcacagcaatattacatccttactgtccgtgcagaagatg
gaggaggccaatttactaccatcagagtgtacttcaatatactggacatcaatgacaacc
caccggtgttcagcatgacctcatacagcacatccttgatggagaacctgtctccaggat
ctgctattctcaactttagcgtcactgatgcggatgatggctccaactcacagctgtcct
tcagcatcgcctctggggacagcgcggggcagtttggcattgaccacagcggggtgctga
gcatcaggcagcctttggaccgggaaagccagtctttctacagcctcgtcgtgcaagtcc
acgacatggcccctctcccggcctccaggtacacaagcacagcccaagtttccattattc
tgctggatgtgaacgacagcccgccgagctttatctccccaaagctgacctatgtgccag
aaaacacgccaatagacacggtggtgttcaaagcacaggcaactgatcctgacagcggcc
cgaacagctacatcgaatacagtttgctttggcctctgggaaacaaattcagcattggca
ctattgatggtgaagtgaggcttaccggggagcttgacagagaagctgtgtccaactaca
ccttaactgtggtagccacagacaagggccagccatccctttcttcatccacggatgtgg
tggttatagtcctggacattaatgacaataacccactttttgcccaaaagctttataaag
tagaggtgggagaaaatactttgacagggacagatttaatccaggtgtttgctacagatg
gagatgaaggtacaaacgggcaggtccgctatgccattgtgagcggagatgccagtaatg
agtttcggatcgactctgtgacgggtgtgataacagttgccaagcctttggacagagaga
gaaaaccctcctacaccctgactgttcagtcatctgaccgcgggagcagccccaggaccg
acactaccaccgtcagcattattctgaaggatgtcaatgattatatccccacatttgaac
tttctccctactctgtaaatgtccctgagaatttagagacgctcccaaaagttattcttc
aggttgtagcaagagatgatgatcaaggtctaaacagcaaacttacttatgtgctggtgg
ctgggaatgaagaaggagccttcaccctctcttccagcggagagctgcgcttggtgcaga
gcctggaccgggaggcaaaagagcagtacatgctactgatcacagctgctgatgcaggat
ctcctgccctcactggcactggaaccattgctgtcacggtggatgatgtcaatgacaatg
tgcccacattcgcctttaacgtgtattccgccactgttcctgaggatgctcctacaggga
cagatattttgctggtaaactcctcagatgctgatgcttctacaaatgctgtcattagct
acaggcttaccggtggcaattcacaattcacaatcaacccatcaacaggacaaatcatca
ccagtgctctcctcgatcgagaggcgagggagaactacactttggtggtggtggcaagtg
acgggggcttccccagggctctctccagctccaccagcgtgcttgtttctgttgctgatg
tgaatgacaacccacccaaatttcagcaccatccctacgtcacccatgtcccttcaccta
ccacttcaggctcattcgtgtttgctgtgaccgtcacggatgcagatgctggctccaatg
ccgagctccactattcccttgtggggaaaaactctgagaaattccacattgacccagcaa
gaggggccatcctggctgcgaacccgctggcaggagagtccgaagtcaccatttctgtgc
acgtgagggacggcggccggtacccaaagacagactctacaactgttaccgtaaggtttg
tgaacagagcagaattccctcgcgttcaggcggatcaagagaccatcacatttcctgaaa
accaagcagttggtacacttgtcaccaccatctctggatcttcagccagaggaggctcct
tgtcttactacattgccagcggtaacctgggcagcaccttcctggttgaccaagtgacag
gacagctttctgttgggcgggctttggatttcgaagccatacagaaatatgtgatttggg
ttgaggccagagatacaggctttcctcccttttcctcatataagaaactggaagtgatgg
ttatggatgtcaatgataatgcaccggagtttgagcaagatcccttcattgcagaaatag
tggagaacctgtccccgcggaagattctgacagtagctgctgttgacagggacagtgggc
taaatggacagctgaattatgaaataattggtggcaatacagagaatagcttcagtatca
atcgagccactggtgagatcagaagtgtgaggcccttggacagggagaagttgtctcaat
acacactaacaataaaagcttcagacaaaggcaccccgctccagagcacgactgtcaaag
ttatcattaatattttagatgaaaacgacaatgccccaaggttttcccagatattcagtg
cttctgtgcctgaaaatgcacctttgggctttacagtaacccgagtcacgacgtcggatg
aagacattggggtgaacgcagtcagcaggtattccatcagggatacaagtctcccattta
ccataaatcccagcacgggggacatcaccatcagcagaccactgaacagggaggacacag
accgctacagaatcagggtctctgcacatgactccgggtggacagtgagcacagacgtca
ccatatttgtcacggacattaatgacaatgccccacgatttacaaagccgtcctattacc
tggagtgtcccgagcttcctgggattgggttaaaggtcacccaggtttcagccaccgatc
ctgatgaagggtctaatggccaagtcttctacttcataaaatcccagtctgagttcttcc
gaattaatgcaaccacaggggaaattttcaacaagcagtatttaaggtatcaaaactcta
gtggttcaagcaatgtcaacattaataggcacagcttcattgttacttcttcagaccgag
gcagtcctccgttaataagtgagacaacggtcaccgttaacatcgtagacagcaatgaca
acgcaccgctattcctcgctcagaagtacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ctgtgaggattggcacaaacttaattaaagttaccgcagtggatgacaaagactttggct
tgaattctgaagtggagtactttatctctgacgagagcaaaaccaataaattccgactgg
acaggagtacaggctggatttctgtgtcatcttcgctaatggccgatttgaacaaaaact
tcctgtttaaagtggaagcaaaggataaaggtaatcctcccctctcatccgaggtggctg
ttgaaatagtggtcacagaggaaaattatcatacacccgagttttctcaaagccgcatga
gtgttactatcccagagagtcactctgttggaacagtggtcaggatggtttcagcccgag
acagagatgcagctatgaacgggttaatcagatacaatatttcctctggaaatgaggctg
gcatctttgctattaacacaactaccggtacactgacgctagcaaaaccacttgattttg
agctatgccaaaagcacgagctagttgttactgccacggatggcggatgggtatccagaa
caggctactgcagtgtcaccgttaatgtaattgacgtgaatgataattctccagcattca
gccctgaggactactttcccaacgtgttagaaaatgcccccagcgggacaactgttattt
gtttaaatgccactgatgctgactctggatctaacgctgtgattgcatatgctattcagt
cctcggatagtgacctctttgtcattgaccccaatacaggaacgatcaccacccagggat
ttttagattatgaaacaaagcaaagttaccatttaacagtaaaggcttttaatgttcccg
atgaggaaagatgcagctttgctagtgtcaacatccagttagaagggacaaacgagtatg
ttccccggtttgtgtccaagctttattattttgaggtttctgaggcagcctccaaaggta
ctgttgtaggtgaagtttttgcaagtgatcgtgacatgggaactgatggagaagtccact
accttatctttggcagcagcagaaagaagggcttccaaatcgatgagaaaagtggtcaga
tctgtgtttcaggacctctcgacagagaaaaagaagaacgaatctctttgaaagttcttg
caaaaaatttggggagcattcgtggtgcggatatagatgaagtaactgttaatatcacta
tactggatgccaacgatcctcctgtttttaccttaggagcctacaatatacgaatcagtg
agggtgttcctccaggcacccacgtcacgtttgtgagtgcctttgattcggactctgtcc
ctagctggagcaggttttcctatttcattgggtctggcaatgacaacagcgccttttcca
tcaacccccagacaggacaggtgacggtcactgcagagctggatcgagaaacgttgcctg
tgtacaacctgtcagtgctagccatcgattcgggaacaccgtctgctacaggaagtgcct
ctttattggtaactttggaagatatcaatgacaatggtcctaccttgtccaccagccaag
gagaagtcatggagaataaccgtgcaggaactctggtgatgacgcttcagtcatcagatc
ctgatctcccaccaaaccaaggtccctttacgtattacttgctcagcactggccctgcaa
ccagctacttcagccttagcaccactggtgtgctgacaaccactagggagattgacagag
agcaaatcagtgatttctacctgtcggtgattacaagagactctggcattcctcagatgt
cttccacaggaaccgtgcagatcaaggtaatagaccaaaacgacaacccatctcagccca
gaacagtagaaatctttgttcactattatggcaacctcttcccaggtggaattttgggca
acgtaaagcctcaggatccagatgtgctagacagcttccagtgctccctcacctcaggag
tcaccagcctcttcagcattcctgggggtacctgtgagctgcactcacaggcaaggtcca
cagatggcacgtttgacctggctgtcctcagcaacgacgggctgcacagtgccgttacca
gcagcatccggatcttcttcacgggctttggcaacgccaccattgacaacagcatcctcc
tccggctgagcgcccacagcatgtgggacttcctgacaaaccactatctccaattcttgc
gcatcgccagctcccagctgacggggctgggcaccgccatccagctctatgggctgtatg
aggagagcaaccacaccttcctgatggcagccgtcaaacgcggcaacaaccagtacgtga
atcccagcggcgtggccaccttcttcgagagcatcaaggatgtcctcttccgtcagagcg
gggtgcggatcgaggctgtggaccatgactggtgcctgcagaacccctgccagaacggag
ggagctgcctgaggaggttggcagtgagcccagctctgaagagccatgagagtgtccctg
tcatcattgtggccaacgagcccctccggcccttcgtgtgccggtgcatgccagggtacg
atgggagcttgtgcgagacggacatcgacgagtgcctcccttccccctgccacaacgacg
gcacttgccacaacttggtggggggcttctcatgcagttgccccgagggcttcactggca
tggcctgtgagagggatgtcaatgagtgcctttccaacccgtgcaaaaacggtgccgcct
gccagaacttcccaggaagcttcaactgcgtttgtaagactgggtatacagggaagacgt
gcgactccactgtcaattactgtgagtgcaacccctgtttcaatggtggatcctgccaaa
gtggggtggagggatattactgccactgtcccttcggtgtttttgggaatcactgtgaac
tgaacagctacggatttgaagagttgtcctatatggagtttcccagtatggatccaaaca
ataattacatctatataaagtttgccactataaagagtaatgctttaatgttgtataact
acgataaccaaaccggagagagggcagaatttctggctctggaaatagcagaagggaggc
tgagattctcctacaatcttggcagtggcacatacaagcttaccacaactaagaaggtgt
ctgatggacagtttcacacagtgattgcccgaagggctggaatggcagcgtcactgacgg
tggattcctgctctgaggatcaggagccaggctactgcactgttagcaacgttgcagttt
ctactgactggactctcgatgtacaaccaaatcgggttactgttggtggcatcaggtcta
tagagcccatccttcaaaggagaggacaggtggaaagccatgattttgtgggctgcataa
tggagtttgcagtcaatggacgtcccttggagcccagccaggctttggcagctcaaggaa
tcttagatcagtgtcccagactagaaggtgcttgtacaaccagcccctgccagcatggtg
gcacctgtgttgatcactggtcatggcagcagtgccactgcagagatggactgacaggaa
agcactgcgaaaaacatgttactgcagacactgccttatcgctagaaggcaaaggacgac
tcgattaccacatgagcccaaacaagaggcgagaatacatgatgaggcacggcactcgag
gcgctggcccaggacccccaaacgtggaccgcttggaagtgaagttcaggacaaggagcg
agaacggcgttttagttcacgtccaggaaagcagcaacttcactactgtgaagataaaag
gtgggaaagtgcattacatatctgacgctggaattgctggaaaagtggaaagaaatatcc
cagaaatatacactgcggatggccagtggcattcggtactcattgagaagaacgggtctg
cgactatcctgtccgtcgacaagactcacagccgagacattctccacgccacgcaagact
ttggtggactaaatgttcttacaatttctttgggagggatcccatcaagccagcctttca
agagcacagttgcaggctttgatggctgcatctcctacatcaagtatggctgggagagcc
ttcccttcactggcaggcacagcctcgccacgctctccaaaacagacccctcagtgaaga
tcggctgccgcggccccaacgtctgtgccagcagtccctgctggggcgagctgatgtgca
tcaaccggtggtacgcctaccagtgcgtcccgccgggcgcctgtgcctccaacccctgcc
aaaatgggggtagctgcgagcctgggctgcacgccggcttcacctgcagctgccccgagg
catacgcaggacggacgtgcgaggcagtggtggcatgcctgggtgtcctgtgcgccccag
ggcacgagtgtagagcagggatcaatggtggccacatctgcctcccagccccacacccca
ccgagctgtccctgcccctctgggctgtgccagctatcgtgggcagctgcgcaacggtcc
tggcgctgctggtcctcagcctcatcctctgcaaccagtgccgaggaaagaagtcaaaag
gtccaaaagaggagaagaaaaaggagaagaagaaaaaagggagtgagaacgtggcgtttg
atgaccctgacaacataccaccttatggcgatgacatgactgtgcggaagcagcccgaag
gaaacccaaaacccgatatcatcgaaagggaaaatccatatctcatctatgatgaaactg
acatcccacacgccacggagacgatccccagcgccccactggcttcccctgagcccgaga
ttgagcactatgacattgacaacgccagcagcatcgccccctcggatgcagacatcatcc
agcactacaagcagtttcggagccacacgcccaagttttccatccagagacacagcccac
tgggctttgcacggcagtcccccatgcccctgggagccagcagcttgacctatcagcctg
cctatgggcagagcttaaggacaacgtctttaagccactcagcatgtcctactcccaacc
ccctgtctcggcacagccccgcgcccttctccaagtcatcgactttctacaggcacagtc
cagcgagggagctgcacctcgccataagggaggggagcccgctggagatgcacaatgatg
tctgccagcccggcatattcaactattccactcggctggggaggagaagtaagagtccac
agacaatggcaagccacggctcccgaccaggaagccgcctgaagcagcccatcgggcaga
tccctctggagactgctcccccagtggggttgtccattgaagaggtggaaagactgaaca
cccctcggcccagaaaccccagcatctgcagcgcagaccacggccggtcctcttctgagg
aggactgcagaaggcccttgtcccggacgaggaacccggccgatggtattcccgcaccgg
agtcctcctctgacagcgactcccacgagtccttcacctgctcagagatggagtacgaca
gggataagcccatagcgtacacctccaggatgcccaagttatcccaggtcaatgagtccg
atgcggatgacgaggacaactacggagccaggctg
DBGET
integrated database retrieval system
