Nestor notabilis (Kea): 104408790
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Entry
104408790 CDS
T08494
Name
(RefSeq) protocadherin Fat 4-like
Organism
nnt
Nestor notabilis (Kea)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
DUF5817_CT
DUF6377
Motif
Other DBs
NCBI-GeneID:
104408790
NCBI-ProteinID:
XP_010016806
LinkDB
All DBs
Position
Unknown
AA seq
2504 aa
AA seq
DB search
MALSRPLVFALIAWVMFFRLDAQQITTIDCDTIPAELMLTGFLDDFTGVIEWITNIPPNV
NLKLGQNLFPEHLPYVELVYDSGSNNATVRTSKPLDVDSIESVHLFYTIVCQRIGTVAAI
DVTIIKVEAVDKDFSPVFNTITYSLWGPNSDYFHIREGDGNVMLKKTLDYNKVNLFNLTV
QAKELMGNNSDTASLVIDVQDYDTLNPYFSQSVYNGNISENQVGPLSINPEKILAKDGDT
GINEKVLYSIKLVEPPAYSNNFIIDADTGVLEVMTAVDREECPYLLVGIQASQQDNTLKT
ADAVVLVTIGDVNDNYPVLSQSSYNVSVPENFPDGMEVLQVTATDKDEGGFQGTFILTPA
DSPFQLSQDGILTVRNSTLLDRERIPSIHLQVTARDHLSPYGEGHSAINILLLDENDNSP
TFRGTPYKQDIFNNMTAGMSILQVAADDPDEGINGEISFTLAGGNEDGYFELDTSTGQIS
LKTVIPLGVNQLKNFVLWITAIDGGTIPRSSSVPVQIFAVGDSRPQFIQKAYNVSVEEEL
DSPAEVARVEYESVNPHIPVRFQVLTESATFDIDVNGIIWTKTKLDYESQKNYILNISLS
DGNTTDYATVFVRVTDVNDNSPVFGITSTTISILENMPPGTSITSVSATDVDEGFNGLVV
YTLKGGEGNMDIDASGLIVLEKELDREKQGFYNLTVIASDQGQPPLSTALSLTVIVDDVN
DNPPVFSSSRYETSVPEDEVLGKTLLTVSATDLDAGVNALVKYSIVSQQPPTSSPMFVVN
SATGQLSLSQQLDYETIKQFEVEVEASDGGQPSLSATTLLVVHVLDVNDNPPEFNQAAYD
VFVLENLQRGSPIYTFNVTDKDEAGFSQGHFIHNSTLFTVDMPGILSLGDTELDRETTSG
FTLQVWAVDAETNGLSSSALFHITLLDVNDNNPEFQMQPYSFEILEGDYMLNASARVGQV
TATDLDEGENARITYYLSAEDGDNPYSIQQDGTISVTGYVDRETKEKYELLLVASDNGVP
QRQNFTYVSIQVLDVNDNPPQFTKAQYSASVHVATAKEGVSVLFVSATDPDIGNNSLISY
SLLNPSDDFHINNRTGEITVSRNLDHITADRVVTLIVIASDHGVPQLTSNASVTLYLLVN
DTSFGLTFESSSYEFSIQENEPSGTAVGSVKALTGSIAVQVVYSLKSHSDKFSVSDQGDI
VALAMLDREERDLYSIIVEAVDSVVPPNTAVTLVTVRVNDVNDNPPVFSTLIQTELSVPE
NAASLDLGVFSATDLDTGVNALISYSLQDDFAGTFHIDSSTGKLMTKTSLDREMVDSYEL
KIIATDSGKPPQSASLVLSITVEDENDNPPVFPQRSYSVTVKENEPPHVILSVAATDADI
GYNAIIHYAIIGETSSFLVGELSGDITTLQPLDYESRSEYTFLLKAFNPGEPDLQDTANI
TVTVEDVNEEGPIFDKPSYHQILLDNSTAGTLVVDINARDENKDYDEGIFYNISGGNSEG
LFSLSSTTGELRLTRDLSKLSVPVYYSLIVTATDSGLPPLSTSVKVSVTIAPIDVSFPVF
SEEVYQPAPLSEKTLPDTFVVHTDVLYKVPVIYSIVAGDEKGYFIIDSSTGIVRTRKNLE
LEDFPATFSVRATDSSTASIFNEALVNVTVIDENDFPPVFPSSLLEATLEENLPATQIIQ
LEAQDNDTGRNGFLTYGILSGDRLKFRIDEATGILSSTTSFDYEEEPTEYQLVIYAEDDG
IPEKKRGYCTVVIKIIDVNDWPPVFDPVTEFSVDENVPVGFIVGKITATDRDTGDNAFIV
YNLTGGAENTFEIDEINGNIKIKNSPDYETLNKYNLTVNAVNNKSAPFLQATTHVTVLVM
DVNDNAPVFAQSSYSASINMINPVGTHVITVSAADKDQGLNGLVEYYILPDLNFIPFFLI
EDMREGKIITAGSLPRSGEMNLTVMARDKGSPSLNATAVVTLDVFDNSPFVPQFNRSEIS
ISVLENTGVDYLIYDFTVIETSGKPIAYTIVSGNEKGHFRLDPESGQLRTAVNLNYEEVS
EYVILVEANENLSPAIEVQHASLFAENVAMLRVSVQDVNEEPVFLSDAYSARIPNSVPYK
YPVITVQATDPDAGDNGLVLYSLVSSQTSEFDIDQNTGQIFTVSVAGKAGTFYLEVQATD
QGTSRLTGQTTVNVTVDSSSGNNILVVVLNEMINIVERNIIEVKRVLEDQLAWNVYIIDV
YSSESESKARSSTDVTYVKITAFDTNQEVPAEDVKRKLQEQKSDIEVELEKIFSRRVTTS
IEEAAADSASPERVATIVLSVLLACSLTGFLVYVVFTIRRKRKQQQQYLVKKQAEVAESI
DNPWASDKNGSVKSLEKLEHVNNVKKETITFSNMGNTEGGDSDKGLTQANDKCSYLETLL
LDFNSEREDNGAAEKSAEPRNADAQHTADFAAKRVTSFPVAESGDCFLTDRNQEPALSLA
PHPPTPPEKELKGVKFSEVAIILDAESEDDESDTDDGFCTNANA
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atggcactttctagacctctggtttttgctttgatcgcttgggttatgttcttccgtctc
gatgcacaacaaatcacaaccatagattgtgacacaatccctgcagaactcatgctgaca
ggctttttggatgattttacaggtgttatagaatggattacaaatatcccacccaatgta
aatttgaaattaggacagaatctgttccctgaacacttaccctatgtggagctggtatat
gattccggatctaataatgccacagtgaggactagcaagccactggatgttgattctatt
gagagtgtccatctcttttataccattgtttgccaaaggattggaacggtagctgcaata
gatgtcacaatcataaaagtggaagctgtggataaagatttttcacctgtgttcaacacc
atcacttacagtctttggggtccaaactccgattactttcatataagggaaggagatgga
aatgtcatgctgaaaaaaacattggattacaacaaggtcaaccttttcaatctaacagtc
caagcaaaggaattaatgggaaacaacagtgatactgcatcattagtaattgatgtccaa
gactatgatacgctgaacccctatttcagtcaatcagtgtacaacggaaacatcagtgaa
aatcaggtgggccctctgtctattaatccagaaaagatactggctaaagatggagacaca
ggtataaacgaaaaagtactttacagcatcaaactagtggaacccccagcctatagcaac
aactttataatcgatgcagacacgggagtgttggaagtaatgactgcagttgacagagaa
gaatgtccatatcttcttgtgggcattcaggcaagtcagcaagacaatactttaaaaaca
gctgatgcagtagttctggttactattggtgatgtgaatgacaactatccagtattgtca
caatcaagttacaacgtctcagttccagaaaatttcccagatgggatggaagttcttcaa
gtaacagctactgacaaagatgagggaggcttccagggaacattcattctcactccagct
gatagtcccttccagctaagtcaagatggcatcctaactgtgaggaactccacgctgttg
gatagggagagaataccatctattcacctgcaggtcactgctagagatcatttgtcacct
tatggtgagggacactctgcaatcaacatactgttgctagatgaaaatgacaacagccca
acctttagaggcacaccatataaacaagatattttcaacaacatgactgcaggaatgtcc
attcttcaggttgctgctgatgatccggatgagggtataaatggagagataagctttacc
ttagctggtggcaatgaagatggatactttgaattggatacatccacaggacaaatcagt
ttaaaaacagtaatcccattaggagtcaaccagcttaagaactttgtcttgtggataaca
gctattgatggtgggacaattcccagaagttcatcagtgccagtacaaatctttgcagtt
ggagattccagaccacagtttattcagaaagcttacaacgtgtctgtggaagaagagcta
gacagtcctgccgaagtagcaagagtagaatatgagtctgtaaatccccatataccagtt
aggtttcaagtactgacggaatctgctacatttgacattgatgtcaatggaatcatctgg
acaaaaaccaagctggactatgaatcccagaaaaattacatactaaatatttccctgtca
gatggaaacactacggactatgctacagtatttgtcagagttacagatgttaatgataac
agtcctgtgtttggtataaccagcactaccatttccattctggagaacatgccacctgga
accagtattaccagtgtgtcagctacggatgtggatgagggctttaatggattggtggtt
tataccctgaaaggtggagaaggaaacatggatattgatgcttcaggattaattgtgctg
gaaaaggaactggacagggaaaaacaaggcttctataacttaacagtgattgccagtgac
caagggcaacccccactgtctacagctctcagtttgacagtcattgttgatgatgtgaat
gacaaccctccggtcttttcatcaagtagatatgaaacaagtgtccctgaagatgaagtg
cttggaaagacactgctgactgtatctgctactgatttggatgctggcgtcaatgctctt
gtgaagtacagcattgttagtcagcaacctccaacctcctcgccaatgttcgttgtcaat
tcagccacaggccagctcagcttgagtcagcagctggactacgaaaccataaagcaattt
gaagtggaagtggaggcatctgatggagggcagccgagtctcagtgctaccacacttctt
gttgtgcacgtactagatgtcaatgataacccaccagagtttaatcaggcagcttatgat
gtatttgtgttagaaaacctgcaaaggggtagtcctatctacacattcaatgttactgac
aaggatgaggctggcttttctcagggacactttattcataacagtactttgtttactgtg
gatatgcctgggatactttcactgggtgacacagaactggacagagagactacatctggc
ttcactttgcaagtatgggcagttgatgctgaaacaaatgggctcagttcaagcgccttg
ttccacatcactcttctggatgtcaatgataataacccagagtttcagatgcagccatac
agttttgagattctggaaggagattacatgttgaatgcttctgctagagttggtcaagtg
actgctactgatttggatgagggagagaatgcacggattacttattacttgtcagctgag
gatggggataatccatatagcatccaacaggatggaaccatttcggttactgggtatgta
gaccgagaaactaaagagaagtatgagctgctattggtggcatctgataatggagttcct
caaagacagaatttcacatacgtcagcattcaagtgttagatgtgaatgataaccctcct
cagtttaccaaagctcaatactcagccagtgtacatgtagcaacagcaaaagaaggagtg
tctgtactcttcgtatctgctactgaccctgacattgggaataattctcttatttcatac
agcctcctgaacccttctgatgatttccatataaataaccgcactggagaaatcactgtc
agccgtaacttggaccatatcacagctgacagagttgttacactgatagttattgctagt
gatcatggagttcctcagcttacatcaaatgcctctgtcactctctacttgctggtaaat
gacaccagctttggactgacctttgaaagctccagctacgagttcagcattcaagagaac
gaaccctcagggactgctgttggctctgtgaaggctctgactggcagcatagctgtacaa
gtggtgtactcactgaaatctcacagtgacaagttctctgttagtgaccaaggagacatt
gtggctcttgccatgttagatcgagaagaaagggacctatacagcatcattgtagaagct
gttgattctgtggtgccacccaatacagctgttactttggtaactgtgagagttaatgat
gtcaacgacaatcctccagttttctcaacactgatccaaactgaactgtcagttcctgag
aacgcagctagtctagacttgggtgtattttctgctactgatctggatacaggagttaat
gcacttataagctactctctgcaagatgattttgctgggactttccatattgacagttct
actggtaaactgatgacaaaaacatcgttagacagagagatggtggacagctatgagttg
aaaataattgccactgattctggcaaaccgccccaatccgcaagcttagttctaagcatc
actgtagaagatgagaatgacaacccaccagtgtttccccagagatcatactctgtgact
gtgaaagagaacgagcctccacatgtgattttgagtgtagcagccacagatgcagatata
ggatacaatgccattattcattatgccataattggagagacttcttcatttcttgttgga
gaactttctggagacattacaactcttcaacctctcgactatgaaagtcgttctgagtat
acatttcttctgaaagctttcaatcctggagagcctgatctccaggacacagcaaacatt
acagttaccgtggaagatgttaatgaagaaggacccatatttgacaagccctcataccac
cagatccttctagacaattctacagctggcacactggtagtagacatcaatgcaagagat
gaaaacaaggattatgatgaaggcattttctacaatatttcaggtggaaactcagaaggc
ctcttcagtctttccagtactacaggagaactcaggttaacaagagacttatccaaactg
agtgtcccagtgtattactccttgatagtcaccgctacggattcgggtctgccacctctt
tcaacttctgtaaaggtgtcagtaaccatagctcccatcgacgtgtcattcccggtgttc
tctgaagaagtctaccagcctgcccctctgagtgagaagacgctgccagatacgtttgtt
gttcacactgatgtgttgtataaggtccctgtgatatacagtattgtagctggggatgaa
aagggttatttcattattgattcatccactggtattgtaagaacaaggaagaacttggaa
ctggaagattttccagccactttcagtgtgcgagcaacggattcatctactgccagcata
tttaatgaagctcttgtgaatgtgacagttattgatgaaaatgatttccctccggttttc
ccatcttctctactagaagcaacattggaagagaatttacctgctactcagatcatccag
ctggaagctcaggataatgatacaggaagaaatggtttcctgacatacggcattcttagt
ggagacagactgaaattcaggatagatgaagcaactggaattctttcttccaccacctct
tttgattatgaagaggaacctacggagtatcagcttgtgatatatgccgaagacgatgga
atccctgagaagaagagaggttactgcacagttgtcataaagatcattgatgtcaatgac
tggccacctgtgtttgatccagtgactgaattcagtgtagatgagaatgtgcctgtggga
ttcatagttggaaaaatcacagcaacggacagagacacaggagacaatgcctttattgta
tataaccttacaggtggtgcagaaaatacatttgaaatagatgaaataaatggcaacatt
aagataaagaactctccagactatgaaaccctgaataaatacaaccttacagtgaatgca
gtcaacaataaatctgcccctttccttcaggcaactactcatgtcactgttctggtgatg
gatgtgaatgataatgctccagtatttgctcagagttcctattctgcttctataaacatg
attaatcctgtaggtactcatgtcataactgtgagcgctgctgacaaagatcaggggtta
aatggccttgttgagtactacatcctccctgatctaaacttcatcccgttcttcctgata
gaagatatgagagaggggaaaataattacagctggaagcctgcctaggtctggagagatg
aatttaacagtgatggcaagggacaaaggctctccctctttaaatgccactgctgtggtt
actctcgacgtgtttgacaacagcccatttgttcctcagtttaacaggagcgaaatcagc
atttccgttttggaaaacacaggagtggattatttaatttatgattttaccgtgattgaa
acttcaggaaaacctattgcttatacaattgtgtctggcaacgaaaaaggtcattttaga
ttggatccagaaagtggtcagctaagaacagcagttaatttgaactatgaggaagtatct
gagtatgtgattctagttgaagcaaatgaaaacctctcacctgccatagaagtccagcat
gcaagcctgtttgctgaaaacgtggcaatgctgagagtgtcagtgcaggatgtaaatgaa
gagccagtatttttgagtgatgcctactccgctcggatacccaactctgtgccgtacaag
taccccgttattacagtgcaggccacagatccggacgcgggagacaacgggctcgtgctg
tacagcttggtgagcagtcaaaccagcgaattcgacatcgaccaaaacacagggcagatt
ttcaccgtgtccgtagcaggaaaggctggaacattctatctggaagtccaagctacagac
caaggcacgagcagactcacaggccagacaacagtcaacgtaaccgtggattccagttcc
ggtaacaacattttggtggtggtacttaatgaaatgatcaatattgttgaaagaaacatc
attgaagtaaaaagggtcttggaagatcaacttgcgtggaatgtatacatcattgatgtt
tattccagtgagtctgaaagtaaagcaagaagcagcactgatgtaacctatgtaaaaatt
actgcctttgacacaaaccaggaggtacctgcagaagatgtgaaaagaaaacttcaggag
cagaagagtgacattgaggtagagctggagaaaatattttcaaggcgtgttaccaccagc
atagaagaagctgctgctgactcagcaagtcctgaacgcgttgcaacgatagtgctcagt
gttctgctagcctgcagcctcacaggcttcctggtatacgtagtttttaccatacgaagg
aaaagaaagcagcagcagcagtatttggttaagaagcaagcagaagttgcagagtctatt
gataatccgtgggcaagtgacaaaaatgggagtgtgaaaagcttagagaagctcgagcac
gtgaataatgtgaaaaaggaaacgatcacgtttagcaacatgggaaacaccgaaggagga
gactctgacaaaggtctgactcaggccaatgacaaatgcagttatctcgagacacttctg
ttagatttcaacagcgaacgtgaagataacggagcagctgaaaaatctgctgagcccaga
aatgcagatgcccagcacactgcagatttcgcagctaagcgggtaaccagctttccagtt
gcagagagcggggattgctttctgacagacaggaaccaggagccagctctttccttggcc
ccgcaccccccaacaccccctgaaaaagagctgaaaggagtgaagttttcagaagtggcc
attattttggacgcggagtctgaagacgatgagtctgacactgacgatggattctgcaca
aatgccaatgcttga
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integrated database retrieval system