Nestor notabilis (Kea): 104408920
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Entry
104408920 CDS
T08494
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nnt03009
]
104408920 (DDX54)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104408920 (DDX54)
Ribosome biogenesis [BR:
nnt03009
]
Eukaryotic type
Pre-60S particles
Helicases
104408920 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
DBP10CT
Motif
Other DBs
NCBI-GeneID:
104408920
NCBI-ProteinID:
XP_010016963
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
SQAGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKVEWGHCVPPARSHHQLC
PCRIIATPGRLVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDCHQTVL
FSATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVVK
PQDQTVVFVATKHHTEYLKELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTD
VAARGLDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLF
LGRPLVLAGTQEMPADAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRVADNAHKQY
LRSRPGPSPESIKRAKDMDVSQLGIHPLFRARFEDTELERLKFVDSIKTYKSKATIFEIN
ATSRTLASTVMRSKRRHDHALIEKYQRGQQEKRKAAPGAPGCAGAWGLMQWFAGSFLDPF
QDVFSTMVGQKRRRGQGGEGGPRKKLQQSVEQDKDFYIPYRPKDFESERGLSVGGKGSPF
EQQAAGAVLDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVKTESGRYISSSYK
NNLYEKWKQKYKVDERDEDEEDGHRREQFRXXHRPPHCPTLSLAVSPPAGPAPAPARVRS
ELKNKQQILKQRKRAAKQRFLQSGGLKRLKARNRQRVQELRQMAFGRR
NT seq
2125 nt
NT seq
+upstream
nt +downstream
nt
agccaggccggggcgcgcgccctcatcctgtcacccacccgtgagctggccctgcagacc
ctgaaattcaccaaagagctgggcaagttcacaggcctcaagacagccctgatcctggga
ggagacaaagtggagtggggacactgtgtccccccagcccggtcccatcaccagctctgt
ccctgcagaatcattgccactcctgggcgcttggtgcacgtggcggtggagatgaaactg
aagctgcacacggtggagtacgtggtgttcgacgaggccgacaggctctttgagatgggc
tttgccgagcagctccaggagatcattgcccggctcccggactgccaccagactgtgctc
ttctccgccacgctgcccaagctgctcgtagagttcgcccgggctggtctcaccgagccc
atgctgatccgtctggatgtggagtccaagctgagtgagcagctcaagctggctttcttc
cacgtgcgtggggacgacaagccggccgtgctgctccatctgctccgcagtgtggtgaag
ccccaggaccagacagtcgtcttcgtggccaccaagcaccacacggagtatctcaaggag
ctgctgacagcccagggcatccgctgcacacacatctacagctcactggaccagaccgcc
cgcaagatcaacatcgccaagttctcccagggcaagtgcccggtgctgctggtcaccgac
gtggccgcccgtgggcttgacatccccatgctggacaatgtcatcaactacagcttcccc
gccaaggccaagctcttcctgcatcgcgtcggtcgtgtggcccgagctggccggagtggc
actgcctactcactggtggctcctgatgagatgccctatgtctttgacctccacctcttc
ctggggcgcccgcttgtcctcgctggtacccaggagatgcctgctgatgctggtggggtc
ctgggccgtgtcccccagagcctggtggacgatgaggagtgcctgctgctcacagaccac
gagggctctctagagctgcggagcctgcgccgtgtcgctgacaatgcccacaagcagtac
ctgaggtcccggcctggcccctcacccgagtccatcaagagggcaaaagacatggatgtg
tcccagcttggcatccacccactgttccgcgctcgctttgaagacacggagctggagagg
ctgaagtttgtggacagcattaaaacctataagtccaaggcgaccatcttcgagatcaac
gccacatcccggacactggccagcacggtgatgcggtccaagcggcgccatgaccatgcc
ctcattgagaagtaccagcgtgggcagcaggagaagcgcaaggcagcaccaggggctcca
ggctgtgctggggcttgggggctcatgcagtggtttgcagggtccttccttgatcccttc
caggatgtgttctccaccatggtgggccagaagcgaagacggggccaagggggagaaggt
ggccccaggaagaagctgcagcagtcagtggagcaggacaaggacttctacatcccatac
aggcccaaggactttgagagcgagagggggttgagtgttggtggcaagggcagccccttc
gagcagcaggcagccggagccgtgctggatctcatgggcgatgaaaaccacaacctcaac
aagagcaagcagctactcaagtgggaccgcaagaagaagcgttttgtggggcagacgggc
caggaggacaagaagaaggtgaagacggaaagcgggcgctacatcagcagctcctacaag
aacaacctctatgagaagtggaagcagaagtacaaggttgatgagcgggatgaggatgag
gaagacgggcacaggcgggagcagttccgnnnnnnacatcgccctccccattgccccaca
ctgagcttggccgtgtcccccccagcagggcctgcgccggcgcctgcccgggtgcgctcg
gagctgaagaacaagcagcagatcctgaagcagcgcaagagggcggccaagcagcggttc
ctgcagagcggggggctgaagcgcctcaaggcccgcaaccggcagcgcgtgcaggagctg
cggcagatggccttcgggcgcaggg
DBGET
integrated database retrieval system
