Nestor notabilis (Kea): 104409061
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Entry
104409061 CDS
T08494
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nnt03016
]
104409061 (TRMT13)
Enzymes [BR:
nnt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104409061 (TRMT13)
Transfer RNA biogenesis [BR:
nnt03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104409061 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
104409061
NCBI-ProteinID:
XP_010017143
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
EEDGRRRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVAEIPEKQV
PLSSLSKEELENLIIKLKKASNGLEFHLQEQILSHQALQEALNDPKNGESAFKHLKQQAS
ILGNMEKLHLLGPGRCFIEFGAGRGKLSHWVDVALQNTQNVQFLLVERATTRFKVDGKHQ
RRDSIFERLQVDIQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDA
ENEEPAPKRSRADQTEVASSDSAGNESSKADCKPVAGIVIALCCHHKCDWTHYVGREFFK
SVGLGPVEFHYFQRMSSWATCGMRETTNKASASEESEEQTNGAEDHEQTVSGIESGPDTL
QGILTAEERKEIGCLCKRLIDHGRIEYLQQRGYEALLQYYIESAVSLENVLLTAVPSPSL
IPEPTTRQNIDLELGGGNRPQNQL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gaggaagacggtaggagaaggattccgtgtcctctcgatccgaaacacaccgtgtacgaa
gaccagctacaaaagcacttaaagaagtgtaattcaagggagaagccaaagccggtctat
tttgttcaagacattaatgcaggtttaaaagatgtcgcagaaataccagaaaaacaggta
cctctctcttctctgtccaaagaagagctggagaacttgataattaagttgaaaaaagca
agtaatggcctggaatttcaccttcaggaacaaatactgtcccaccaggctttacaagaa
gccttaaatgaccccaagaatggagaatctgctttcaaacacttgaaacaacaggcttct
attttaggtaacatggaaaaattacatttacttggtccaggaagatgttttattgagttt
ggagctgggcgaggaaagctctctcattgggttgatgttgccttgcagaatactcaaaat
gttcagtttttgcttgtggaaagggcaactacacgatttaaggtggatggaaaacatcaa
aggagagattctatatttgaaaggcttcaagttgatattcaacatttatgtttaaataag
gtacctattttggagaagaaaaagctaccagtggtaggaattgggaagcatttgtgtggt
gctgcaacagatcttgctttgagatgcttggttgaaagttacacaacttgctgtgatgca
gaaaatgaagagcccgcaccaaaacgctctagggctgatcagacagaggtggcttccagc
gattctgctggcaatgaaagcagcaaagctgactgtaagcctgtggctggaattgttatt
gcgctgtgttgccatcacaagtgtgactggacacactatgtaggcagagagttctttaaa
tcagtaggacttggaccagtggaatttcattattttcagagaatgagtagctgggccacg
tgtggcatgcgagaaaccacaaacaaagcctccgcaagtgaagaaagcgaagagcaaact
aacggcgcagaggaccatgagcaaacagtcagcgggatagagagtggtcccgatacttta
caagggatacttacggctgaagaacggaaggagataggctgcctctgtaaacggctcatt
gaccatggacggattgagtatctacaacaacgaggatacgaggctctactacagtattac
atagagtcggccgtgtccttggagaatgtcctgttgacagctgtcccaagtccatctttg
ataccagagccaactacacgacagaacatagatttggaactggggggtgggaaccgacca
caaaaccagctataa
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