Nestor notabilis (Kea): 104409098
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Entry
104409098 CDS
T08494
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnt03041
]
104409098 (YTHDC2)
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104409098 (YTHDC2)
Spliceosome [BR:
nnt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104409098 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
AAA_19
Ank_2
HA2_N
nSTAND3
Ank
AAA_22
ATPase
Ank_4
PhoH
AAA_23
AAA_7
AAA_16
AAA_29
ResIII
SRP54
AAA_30
AAA_25
Motif
Other DBs
NCBI-GeneID:
104409098
NCBI-ProteinID:
XP_010017187
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MEFPSSFTSTERAFVHRLCQSLGLISKSKGKGANRYLTVKKKDGSELAYAVMTCVLAPST
KHAVRNLIQRFPVTNKERTELLPKTERGNACAVESENREVNKTSGRLNNGIPQVPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKDNKVVLIVGETGSGKTTQIPQFLLDDCYKTGTPCRI
FCTQPRRLAAVAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGILLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLIKLRDVLQKHTNLKLIISSAALDANLFIRYFGSC
PVIHIQGRPFEVKEMFLEDILRSTGYTNKEMVKYRKEKQREEKQQSSLTEWCSAHENNSK
LESQRQRSIPSPTEEYNLLDDGGDTVFNQLTEKDVNCLEPWLIKEMDSCLSDIWLNKDVD
SFAQVFHLILTENISVDYRHSETSATALMIASGRGFLSQVEQLISMGASIHCKSSNGWMA
LDWAKRFGQTEVVDLLESYSASVESGNLDESFLVQTSGSDLNAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICSSCDAGAILIFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHS
NMQTLDQKKVLKSPPSGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALSCVTML
KMVWISKASAIQRKGRAGRCQPGVCFRLFSRLRFQSMLEFQTPELLRMPLQELCLHTKLL
APINCPIVDFLMKAPDPPPALIVRNAVQILKTIDAMDPWEDLTELGYHLTELPVEPHLGK
MVLCAVILKCLDPILTIACTLAYRDPFVLPALASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIVGMRTQLLGQLRASGFVRARGGADIRDVNT
NSENWAVVKAALVAGMYPNLVHVDRESLILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIFDEMTRAHRIANIRCCSVVTPVTVLLFCGPARLPSNALQEPSSFQGD
GLSNDNSDSEVEDKTTANLALLKLDEWLHFRLDPEVSNVSLQCLFLL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcttctttcactagtactgaaagagcatttgttcaccggctctgtcag
tctcttgggctgatatctaaaagtaaaggaaaaggagcaaatagatatctgactgtgaag
aagaaggatggatcagaactagcatatgcggtaatgacttgtgtcttggctcccagtacg
aaacatgctgttcggaatttaattcagagatttcctgtcacaaataaagaacgaacagaa
cttctgccaaagactgagcgaggaaatgcgtgtgctgttgaatctgaaaacagagaagta
aacaagacaagtggacgacttaacaatggtataccccaggttccagtgaaaagaggggaa
tcagagtttgattccttcaggcaatcactaccagtttttgaaaaacaggaagaaattgtc
aaaataataaaggacaataaagttgttttgattgtaggagagactggatcaggaaaaact
actcaaatacctcagttccttcttgatgactgttacaaaactggaactccttgccgtata
ttttgcactcagccaagacgtttggcagcagttgctgtggctgaaagagtggcagcagaa
agaagagaaaagattggccagacaattggttatcagatccgattagaaagcagggtttct
ccaaagacactgttaacattttgcactaatggcatactacttcgcacactgatggcagga
gacagcactttatcaactgtgacgcatgttatcgtggacgaagtacatgagagggatagg
ttcagcgacttcttgttaataaaactgagagatgtgttgcaaaagcatactaatttaaaa
ctaattatttctagtgctgctttagatgcaaatctctttattaggtatttcggaagttgt
ccagtaatacacatacaaggaagaccttttgaagttaaagagatgtttttggaggacatt
ttacgaagcactgggtatacaaacaaagagatggtaaagtacagaaaagagaagcagcga
gaggagaaacagcaaagcagtcttactgagtggtgttctgctcacgaaaataatagcaaa
ctggaatctcaaagacaaagatctatcccaagtccaactgaggagtataatctgttggat
gatggtggtgacacagtatttaatcaactgactgaaaaagatgtgaattgccttgaacca
tggctaataaaagaaatggactcatgtctttctgatatctggttgaataaagatgttgat
tcctttgctcaggtgttccacctcattttaactgaaaatatcagtgttgattataggcac
agtgaaaccagcgcaaccgcactaatgattgcctcaggcagaggctttctgagtcaagta
gaacaactaataagtatgggagcaagtatccactgcaaatcatccaatggctggatggct
ttggactgggctaaacgatttgggcagacagaggtggttgaccttttagagtcctacagt
gcttcagtggaatctggaaatctggatgaaagtttcctggtccaaacaagtggtagtgac
cttaatgcagaggacagagaactgctgaaagcttatcatcacagttttgatgatgaaaaa
gtggatctggacctgattatgcacttactttataacatctgtagtagttgtgacgctgga
gcgattttaatatttcttcctggatacgatgagatagttagcctgagggaccgtattctt
tttgatgacaagagatttgctgataatgctcacagataccaagttttcatgcttcattca
aacatgcagactttggatcagaagaaggtgcttaaaagtccaccttctggcatccgcaaa
ataattctttccactaatattgcagaaaccagcataaccgtcaatgatgttgtattcgtt
attgactcaggcaaggtgaaagagaagtcttttgatgcactgagctgtgttacaatgctg
aaaatggtgtggatttcaaaggccagtgctatccagagaaaaggcagggctgggcgctgt
cagcctggagtctgttttcgtctcttcagcaggcttcgatttcagagtatgttggaattt
cagactccagaacttctaagaatgccacttcaggagctatgtttacacacaaaacttctg
gctccaattaattgtccaattgttgactttcttatgaaagctcctgatcctccaccagct
ttaattgtgagaaatgctgtgcaaatactgaagacaatagatgccatggacccttgggaa
gatctcactgaacttggctatcatctcactgaattaccagtagagccacaccttggtaaa
atggtgttatgtgctgttattttgaagtgcctggatcctattcttactattgcttgcact
cttgcatatcgagacccttttgtcctacccgcactggcttctcaaaagcgtgcagccatg
ctgtgtagaaaacgttttactgcaggaacgtttagtgaccatatggcgcttctcagggct
tttcaggcatggcagaaggcgcgcagtgatggctgggagagagccttctgtgaaaagaac
ttcttgtctcaagccacgatggaaatcattgtaggaatgagaacccagttgcttggccag
cttagagcctcaggttttgttagagccaggggaggagctgatatcagagatgttaatact
aactctgaaaattgggctgtagttaaagctgccttagtggctgggatgtatcccaatcta
gttcatgtagacagagaaagcctgattttgactggaccaaaggagaagaaagtgcgattt
catcctacatctgttcttagtcaacctcagtataaaaagattccccctgcaaatgggcaa
gctgcagccattcaggcactccctacagactggcttatatttgatgaaatgacgagagct
cataggatagcaaatatcagatgctgttctgttgtaacacctgtcactgtgttactcttc
tgtggaccagctagattgccaagtaatgctttgcaggaaccttcgtcttttcaaggggat
gggttatctaatgataacagtgatagtgaagtagaggacaaaacaactgctaatttggca
ctactgaaactagatgaatggctgcacttcagactggaccctgaagtaagtaatgtatca
cttcaatgcttgtttctttta
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