Nestor notabilis (Kea): 104409303
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Entry
104409303 CDS
T08494
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104409303 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nnt04131
]
104409303 (TGFBRAP1)
Membrane trafficking [BR:
nnt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104409303 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
104409303
NCBI-ProteinID:
XP_010017439
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKISSAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPTGARIKGAVT
FTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIEDSTRSDLYEYIVDFLTFCSDQDL
VWKYFEWVLQKNEEVGVQIFTKRPLEEQEKTNMNSDDIISCLNKYPKARIKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSGTTDNCTETTELLLKLRSLLQKSDLYRIHFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDYHAAEEYCIWNSENRDMQYRRRLFHMLLS
VYLNPGTSDCALVMAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQAALGLAQAENLIYKHEKVKQRGTPILLSDKKVCQVCQNPFCEPVFVRYPNGGMVHT
HCAANRHLNSNMTHHSSSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattacatcaacatcgaatgcattgagtgttgtggaaagaacctctacattggaacc
aatgactgctttatctatcactttctattggacgaaaagatatcatcagctggaaaaata
acttttgctgccaccaagcaactacataaatacctgggcttgaagaagcctgtgagtgag
ctgaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacaataacacta
gttaacatgatgaacctggaacctgtccccactggcgctcgaatcaaaggagccgtgaca
ttcacattaaatgaaaaccccgtgagtggggatcctttctgtgtcgaagtctgcattatc
tcggtcaagcgacggaccatccaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttgtgt
cttgcgcttactacgcagtatatcattttgaattataatactggagtctcccaggatcta
tttccttactgcagtgatgagaaacggccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccctggaggcctaggcatgtttgcaactgtagatggcatttcacagcgt
gcccctgtgcactggtcggagaacgtgattggagcagctttgtgctttccttatgtggtt
gctcttgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aataagggagtgtatatcttggtgccactacctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctccagcaggcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatacggtctcat
ccccctctgcatgagtacgcggacctaaaccagctgacccaaggggaccaggaaaagatg
acaaaatgcaaacggttcctcatgagttacttgaatgaagtccgcagcactgaggtggca
aatggctacaaggaagatattgacacagctttactcaagctatatgcagaggcaaatcat
gaaagcctgctggatctgctagtttcggagaacttttgtctcttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgcacttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagttgatggagacattgaagactctaca
cgttcagatctctatgaatacatagtagacttccttacattctgctcagaccaagatcta
gtgtggaaatactttgagtgggttttacagaaaaatgaagaggttggtgtacagattttc
actaaaaggcctttggaagaacaggagaaaaccaacatgaattcagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtattaagtatctagaacatctagtactggaaagg
aagatagagaaggaaaagtaccatactcatctagctgtcctgtacttggaggcaatactt
cagctaaaatctgggaccacagataattgtacagaaacaactgaactgctgcttaaacta
cgcagtcttcttcagaaatctgatctttatagaattcactttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatggaaagctagaagaacacgagaag
gctttgcatatccttgtccatgagttaaaggactaccatgctgctgaagaatactgtata
tggaactctgagaacagagacatgcagtacagacggaggctattccatatgttgctgtca
gtgtatctaaatccaggcacttcggactgtgcactagtcatggctgctgtggacctcttg
aataaccacgctgctgaatttgatgcgggtctagttttgcaggtggtgcctgacagctgg
tcagtgcagctcctctccccgttcctggctggagcagtgaggcaaagcattcatacaaaa
agaatgactcaggctgcacttggcttagcacaagctgaaaacttaatctacaaacacgag
aaggttaaacaaagaggaactccaattcttctttcagacaaaaaggtctgtcaggtgtgc
caaaatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatggtgcacaca
cactgtgctgcaaacagacatctgaattcaaacatgactcatcactcttccagctccagc
aatcagacttga
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