Nestor notabilis (Kea): 104409775
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Entry
104409775 CDS
T08494
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nnt04147
]
104409775 (COL18A1)
00535 Proteoglycans [BR:
nnt00535
]
104409775 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
nnt00536
]
104409775 (COL18A1)
Exosome [BR:
nnt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104409775 (COL18A1)
Proteoglycans [BR:
nnt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104409775 (COL18A1)
Glycosaminoglycan binding proteins [BR:
nnt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104409775 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104409775
NCBI-ProteinID:
XP_010018044
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
NLSTEISLLELIGDPPPEEILKINGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLF
HIQPTTPRAGVLFAVTDSSQSIIYVGVKLSDLRAGKQHIIFYYTEPGSPRSYAAANFTVP
TLLNQWTRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEDGSGLFVAQAGGADPDKY
QGVIADLKLQGDPRAAERQCEDEEDDAEEVSGDFGSGAEGGHQPLGKVGGVPGLMDAIPV
TSPPVVAGSGGSMKLAERTRAEETLQVSRGGTGPRGDKEKKGEHGLKGDVGTSSIVVSGS
VKGEKGEKGELGVKGSAGFGYPGSKGQKGEPGNPGPPGSLSRHADSLVVEQVTGPPGPPG
KDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKGEKGEPGMGPRGPPGPPGPPGP
PGPFSKHDKLVGAPGIGMGKHQATXXXXXXXXXPRGPPGVPGLPGEPGRFGMNHTDLQGP
PGLPGRDGIPGPPGPVGPPGRDGAAGQPGPKGERGDMGDLGLPGVPGPKGSKGETGPAGA
PGETGLAGLPGPMGPRGPPGPPGPPGPPGPGYEAGFGDMEGSGLMFASGSPGPRGPEGPQ
GVPGLPGVKGEVGSPGQPGLPGPKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGDKGER
GQDGVGLPGPPGPPGPPGQVIAVSSEDSLMAFPGPEGRLGHAGFPGLVGPKGDRGASGPQ
GSPGLKGEKGEPGVIISPDGAMVTAKVKGEKGEPGLRGPVGPPGPQGRAGMKGEIGFPGR
PGRPGMNGLKGEKGDPADVSGVMGLRGPPGPPGPPGPPGPPGSIVYDSSNVSNNTVRGFH
QFPGQKGEKGDTGPPGPPGHFPYDSSHFGASLRGDKGDAGPKGEKGEPGSTPIYNPSLSG
LPGPPAQGYPGLPGPKGDSIVGLPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHR
QAISIPGPPGPPGPPGPPGSSGMSLGLRTLPTYQAMLSTAQDLPEGSLIFLSDRLEEHTL
MPSSALPRDPLHPLRNHGPHPTARPWRGDEVVANQHRVPEQPLLHHQHELLHLVALNTPL
SGGMRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRATVPIVNLRDEVL
FTNWEALFTGSGAPLRAGSRILSFDGRDVLRDAGWPQKSVWDGSDVKGRRLPESYCETWR
TEENTATGQASSLGSGKLLEQEASSCQHTFIVLCIENSFMTAAKK
NT seq
3740 nt
NT seq
+upstream
nt +downstream
nt
agaacctgagcactgagattagcctcctggagctgattggagacccccccccagaggaga
tcctcaagatcaatggtcctgacaacaaccccggttatgtattcggccccaacgccaaca
caggccaagtggcccggtaccacctcccgagccctttctaccgggacttctccctcctgt
tccacatccaacccaccaccccaagggctggagtgctctttgctgtcacggactcctcgc
agagcatcatctatgtgggtgtcaagctgtcggacctgcgggcgggcaagcagcacatca
tcttctactacacagagccgggctcgccgcgctcgtacgcagcagccaacttcaccgtgc
ccaccttgctcaaccagtggacgcgctttgccatcagcgtggaggaggatgaagttatcc
tctacctggactgtgaggagcacgagagggtccgatttgagcgctccccggatgagatgg
agctggaagatggctccgggctctttgttgctcaagctggaggggccgacccggataaat
accagggagtcattgctgatctgaagctacaaggggacccgcgggcagccgagcggcagt
gtgaggatgaagaggatgatgctgaggaggtctccggtgacttcggcagcggggcggaag
gtggacaccaacccttggggaaagtcgggggtgtcccagggctgatggatgccatccctg
tcacctctccccctgtggtggcgggcagtgggggctccatgaagctagccgagaggacca
gagcagaggagacgctgcaggtctccaggggaggcactggccccagaggtgacaaggaga
agaagggagaacatggccttaaaggagacgtgggaaccagcagcatcgtggtgtcgggca
gtgtcaagggagaaaagggggagaaaggagagctgggtgttaagggcagcgctggctttg
gctaccctggctccaagggccagaaaggggaaccagggaaccctggtccccctgggagcc
tgtcccggcacgctgacagcttggtggtggagcaggtcaccgggcccccagggcccccag
ggaaggatggagcccccggcagggatggagaacctggagatcctggagaggacggcaaac
caggtgatatggggccccaggggttcccagggacaccgggggagcctggtctgaaggggg
agaagggtgagccaggcatggggccgaggggaccccctggaccacccggccccccgggac
caccgggacccttctccaagcatgacaagctggtaggtgctcctgggatagggatgggga
agcatcaagccacnnnnnnnnnnnnnnnnnnnnnnnnnngtccccgaggtccccccggtg
tgcccggtttgccaggggagccaggacggtttgggatgaaccacacggacctgcagggac
ctccgggattgccaggcagggatgggatccccggacccccggggccagtgggtcctcctg
gaagagacggggcagccgggcagccaggacccaaaggagagcggggcgacatgggtgacc
tcggcctccctggtgtaccaggacctaaaggcagcaagggagaaacaggaccagcaggag
ccccaggagaaacgggcttagctggtctacccgggcccatgggaccccgtgggccaccgg
gtccccccggaccaccaggaccaccagggccaggctacgaggctggatttggtgacatgg
agggctcggggctgatgtttgccagtggttcccctggaccacgtggacctgaaggaccac
agggggtgccaggactgccaggggtgaagggggaggttggcagccccgggcagcctggtt
tgccaggaccaaagggagatgctggtgttcctggtgtggatggccgccctggcctggagg
gcttccctggaccacagggacccaaaggtgacagaggcagccctggcgacaagggcgagc
gaggccaagatggtgtggggctgcctggtccccccggcccccctggtccccctgggcagg
tcattgctgtctcaagtgaagattctttgatggcttttcctggtccagagggcagactgg
gtcatgctggctttccgggcctggtgggaccgaaaggagacaggggtgcatctggtcccc
agggctctccggggttgaagggggaaaagggggagccgggtgtcatcatcagccccgatg
gggccatggtcactgcaaaggtgaaaggagaaaagggggagccagggctacgaggaccag
taggaccccctggtccccagggacgagcagggatgaagggagagatcggcttcccgggca
gacccggacgtcccggcatgaacgggctgaagggcgagaagggggaccccgcggatgtca
gtggcgtgatgggcttgaggggtcccccaggacccccaggccccccggggccccctgggc
cacccggcagcatagtgtatgacagcagcaacgtgagtaacaacacggtgaggggtttcc
accagtttccaggacaaaagggagagaagggtgatactggacccccgggacccccaggcc
acttcccctacgactcaagtcactttggtgccagcctgcggggtgacaagggggacgcag
gtcccaagggggagaagggcgagccgggcagcactcccatctacaaccccagcctctccg
ggctgccgggacccccagctcagggctaccctgggttgccaggtcccaaaggggacagca
tcgttggcctgccagggcctcctggacctcagggcccccctggaattggctatgaggggc
ggcagggccctcccggccctcccggcccccctggtccaccctccttcccaggtccccata
gacaagctatcagcatccctggaccccctggaccaccaggaccccctggaccaccaggca
gtagcggaatgtccttagggcttcgcaccttgccaacgtaccaggcgatgctgagcacag
cgcaggacctgcccgagggcagcctcatcttcctcagtgacaggctggaggagcacaccc
tgatgcccagttcggctctgccccgtgaccccctgcaccccctccgcaaccatggccccc
atcctaccgcccgaccctggcgtggggacgaggtggtggccaaccagcaccgcgtgcccg
agcagcccctgctccaccaccagcacgagctccttcacttggtggccctgaacacgccgc
tgagcggtggcatgcgtggcatccggggggctgatttccagtgcttccagcaagcccgac
aggtcgggctggccggcaccttccgcgccttcctgtcctcccgcctgcaggacctctaca
gcatcgtgcgcagggctgaccgtgccaccgtgcccatcgtcaacctccgggatgaagtgc
tcttcactaactgggaagcccttttcacgggcagcggggctccgctgcgagccggttccc
gcatcctctccttcgacggccgggatgtcctgagggatgcaggatggccccagaagagtg
tctgggatggctcagatgtcaagggccggcgcttgcccgagagctactgcgagacatgga
ggacagaggagaacacagccactggccaagcttcctccctgggctctggcaagttactgg
agcaggaggccagcagctgccaacacaccttcattgtgctctgcatcgagaacagcttca
tgaccgctgccaaaaagtga
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integrated database retrieval system
