Nestor notabilis (Kea): 104410374
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Entry
104410374 CDS
T08494
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03013
Nucleocytoplasmic transport
nnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104410374 (CASC3)
03015 mRNA surveillance pathway
104410374 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104410374 (CASC3)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104410374 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104410374
NCBI-ProteinID:
XP_010018826
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKRDSNDSSASASKAEKGDEKTD
SKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEXXXXXXXXXXXXXFFEHDLRGQT
QEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRR
MRKQRFGSPPQRDPNWSNERPNKSPRHQGADSTSAPPRTFTNRSSAGTGRMPPPRNYPRL
GGYKETRPSYRALEASVQHLSRNGEQVKQESSYRGKRAEHTPPRDKSPEVEAAHVHSSPV
KEEVALENQTTAADAAQPPPDRPVEKKSYSRARRTRIKAGDAGKLADEVPASEGLASVPP
KPVQAETSPPPAKSSNWESPVESSLDGLEQEITQMNLTEQNWAPGQSQFIQPRELRGIPN
HMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQFQ
GPIYTHSESPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPGQPPPQ
QLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQV
QPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcatcgagggagatgctgtactctcagattatgaaagcgcagaagat
tcagaggcagaggaagaggattacagcgaggaagaaagtgccaaagtggaactgaagcgg
gatagtaatgattcctctgcatcagcgtcgaaagcagagaaaggggatgagaaaacagac
tctaagggcgctgtgactggtgagagacaaagtggggatgggcaggagagcactgaaccc
gtggagaataaagttgggaaaaaggttcccaagcacctggatgacgatgagnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctttgagcatgacctccgagggcagacg
caggaggaggaggtcaggccaaagggtcgtcagcggaagctgtggaaggacgagggccgt
tgggagcatgacaagttccgggaggatgaacaagcccccaagaccaggcaggagctgatt
gcactctatggctacgacatcaggtcggctcacaaccctgatgatatcaagccgaggagg
atgcgcaaacagaggtttgggagtcctcctcagcgagatccaaactggtccaatgagagg
cccaataagtccccaaggcaccaaggtgcagacagcacttcagctcccccccgaaccttc
accaacaggagctctgcagggacggggaggatgcctccacctaggaactacccaaggttg
gggggctacaaagagacccgtccaagctaccgagctttggaagccagtgtccagcatctg
tctcggaatggtgagcaagtgaaacaggagagcagctaccgagggaagcgtgcagagcac
actccaccgagggacaagtcacccgaggtggaagcggcacacgtccacagcagccctgtg
aaggaggaggttgctttggaaaaccaaaccacagctgcagatgctgcacagccgccacca
gacagaccagttgaaaagaagtcttattcccgggcaagaaggaccagaatcaaagctggg
gatgcagggaagctggcagatgaagtgcctgcttcagaagggctggcttctgtgcctcca
aaacccgtgcaagctgagacatcccccccaccagccaagagcagcaattgggagtcgccg
gtagaatccagcttggatggactcgagcaagaaataacccaaatgaatctcactgagcag
aactgggctccagggcagtctcagttcatacagccccgggagctgaggggtattcctaac
catatgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatggccgtg
caggggggccgtgtcaaacgctactcatcacagcggcagagaccaccggtgccggagcct
gccccccccatgcacatcagcatcatggaagggcactactacgacccactacaattccag
ggaccaatctacacccacagtgagagcccagccccactgccgccccaggggatgatcgta
cagccagaaatgcaccttcctcatccaggtttacatccccaccagacgccagcccccatg
gcaaaccccgggctgtaccctccacccgtctccatgcccccagggcagcccccgccacag
cagctgctggcaccgacttacttctcccctcctggagtcatgaatttcgggaatcctggc
tatccctacccaccgggagcgctgccccctccgccccctccgcatctctattccaacaca
caggcccagtcccaggtgtatggaggggtcacctactacaacactgtccagcagcaagtg
cagcccaagccttctcctccccgaaggacatcccagcctgtgactatcaagccaccacct
cctgaggacagcaaaggtgaaaaatccaaggagaggagcaacacgtag
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