Nestor notabilis (Kea): 104411038
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Entry
104411038 CDS
T08494
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104411038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnt03041
]
104411038
03009 Ribosome biogenesis [BR:
nnt03009
]
104411038
Enzymes [BR:
nnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104411038
Spliceosome [BR:
nnt03041
]
Complex A
U2 snRNP components
U2 related factors
104411038
Complex B
104411038
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104411038
Ribosome biogenesis [BR:
nnt03009
]
Eukaryotic type
90S particles
Helicases
104411038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
AAA_19
SRP54
ResIII
Atrophin-1
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
AAA_23
Motif
Other DBs
NCBI-GeneID:
104411038
NCBI-ProteinID:
XP_010019668
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
XNIQVSHFLLCFLTCFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPSSNST
YYAAAGLQTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSF
VLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVL
KEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQ
QQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVNTV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
tgaaatattcaagtgtctcattttctgctgtgtttcttaacttgttttaggaaagatcgt
gaccgggacagggaccgtgatgaccgttctaaagatcgcgacagggatcgtgacagagat
agagatcgtgacagagaaagggacaaggaaaaagatttgcgaccttcgtctaactctacc
tattacgcagctgctgggttacaaaccataaaaccagctatgattccacacagtattaac
cctttcacaaatctaccacatacaccacgatactatgacatcctgaaaaaaaggctacag
cttcctgtttgggaatataaagaaagatttacagatattttgattagacatcagtcattt
gtgctggttggagagactgggtctggtaaaacaacacagatccctcaatggtgtgttgac
tacatgcgctcattacctggaccaaaaaggggagtggcatgtacccagcctaggagagtg
gctgcaatgagtgtggcacagcgggttgctgatgagatggatgtcatgctgggccaggag
gttggttactctattcgatttgaagactgcagcagtgcaaaaacaattctgaagtatatg
actgatgggatgttacttcgtgaagcaatgaatgatcctttgctggagcgctatggtgtt
ataattcttgacgaggcccatgagagaacactggctactgatattttgatgggagtcttg
aaggaagttgtaagacaaagatctgatttgaaggttatagttatgagtgctactttagat
gctggcaagtttcagatctattttgataactgtccccttctgactatcccgggtcgcacc
catcctgtggagatattctatactccagaaccagaaagggactaccttgaggctgccatt
cgaacagtgatccagattcacatgtgtgaagaagaggaaggagatcttctactcttcctt
actggacaggaggagatcgatgaagcttgcaaaaggataaaacgtgaaattgatgattta
ggccctgaagttggtgacatcaaaatcattccattgtattccacccttcctccacaacag
cagcaaaggatttttgaacctcctccaccaaaaaagcaaaacggagcaataggaaggaag
gttgttgtgtccactaatattgctgagacatcattaacaatagatggtgttgtgtttgtg
attgatcctggctttgcaaaacagaaggtaaacactgtttaa
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integrated database retrieval system
