Nestor notabilis (Kea): 104412029
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Entry
104412029 CDS
T08494
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104412029 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nnt01009
]
104412029 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nnt04515
]
104412029 (PCDH9)
Protein phosphatases and associated proteins [BR:
nnt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104412029 (PCDH9)
Cell adhesion molecules [BR:
nnt04515
]
Cadherins
Protocadherins
104412029 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
Cadherin_4
7tm_3
DUF6377
RibLong
Motif
Other DBs
NCBI-GeneID:
104412029
NCBI-ProteinID:
XP_010020923
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINIMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGXXXXXXXXXXXSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHF
YWSISTAYKCPINQY
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctttgattgcctgtttgaggctggattcc
gctatagctcaagaacttatttacactattagagaggaactgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcacctctggtcaaagtgtccagt
aacaccggcgaaatctttacgacatctaacagaatagacagagaaaaactttgtgctgga
gcttcgtatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctgcccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaagatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactatgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcaacagaacttggacagagagcaaaaggacacctatgtaatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtggaggttcat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctactgatgcagat
ataggaagcaatgcagaaatcagatacatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacacctgcc
cgggccactgttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgctctaattacagtttcagataaggacactgatgtgaacggcaaagtgata
tgtttcattgagagagaggtccccttccacttgaaggcagtttacgacaaccagtacttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtgtatcagcttggccctaatgcctccttttttgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagggaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtc
actgtgttggacgaaaatgacaacagtcccaaatttactcataaccacttccagtttttt
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacggtgactgatgcggat
gctggggaaaataaagcagtgaccctttccattctgaatgacaatgaaaattttgtgctg
gatccatactctggagttataaagtccaatgtttcctttgatcgagaacagcagagctcc
tacacttttgatgttaaggcagtggatggagggcaaccacctcgctcttctacggcgaaa
gtaaccataaacatcatggatgttaacgataacagccctgttgtcatttacccaccttct
aacacttcttttaagctagtgccactctcagcaattccaggatctgtggtagccgaagtc
tttgctgtggatatagacactggcatgaatgctgagcttaaatacacaattgtaagtgga
aataacaagggtctgtttcggattgatccggtgacaggtaatatcactctggaagaaaaa
ccgactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtgtttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggagacacctttggaccggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacgatcatgatcgctatcgtg
gcgggtgccatggttgttatagtggtgatatttgtcactgttcttgttcgctgtcgccat
gcgtccagattcaaagccgcacagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagtacatgaacctatc
aacgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcatctccgcagtctgcttttcatctcaaacctgacactccagtttcagttaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgnnnnnnnnnn
nnnnnnnnnnnnnnnnnnncttccactagttcagatcacttcagtgcctcagagtgcagt
tcccaaggaggcttcaagacaaagggcccattacacaccagacaggtaaatgagcacttt
tactggtctataagtactgcatacaagtgcccaatcaaccagtattaa
DBGET
integrated database retrieval system
