Nestor notabilis (Kea): 104412429
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Entry
104412429 CDS
T08494
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnt03021
]
104412429 (RPAP1)
Transcription machinery [BR:
nnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104412429 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
104412429
NCBI-ProteinID:
XP_010021454
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MFSRPKPGESEADLLHFQNQFLAARASPAVKVVKKADKRKGEKRTTDAERPLLQDSKDVV
MLDDFPDTLPALTPAPPKKSKIKSAYVHFEDEDPEERLESHDRHITAVFSKIIERDTSAA
AVTMPVPTGDPFPRTFHRSEIKSEVKVASGRKSIFAQKMAARRAAEKAATAPSAADCVQI
GSAAPNAQDPGGSAEEVPFLSTRDDKAGDFLTSQQPCLITGEGLGSQKSEEEVQAIHKEN
LEKLQSMSEEEIMQEQERLLAQLDPSLVAFLKSRRGGSEGQKKELKMEQNRQEEFVESLP
VAQHGVRSSLSTQESGLEESVREEENTKVEITDDDLPVKPKKEWIHMDNVEFEKLEWMKD
LPLPQQKKTKKGMQARFSLKGELIPADADLPTHLGLHHHGEEAERAGYSLQELFHLSRSQ
VIQQRTLALQVLGRIVQKARAGEFVSSLKGSILRLLLDAGFLFLLRFSLDDAVDNVMAAA
VGALRALLVSLDDEKYLDWTFSWYQGMAAFPFVPSNEEEEEEEDEELNGTEKSQDKKLKD
ENKPDPDVARYDVVKGLLKTRIQHRLRYILEVVRPVPTVVLDILHILTHIARHSSEACSQ
LLDCPRLIETIVREFLPTQWDPQVAEPGCLLTSLHGVACATAMKFIRVLAGGGRNATARL
LNKFEMKSRLSRFIAEDPVDLLLPREEAIRLSTEAFRLWAVAAAYGQACDLYRDLYPVLV
RILQSLPELLSTCSEKSPLAELCVQRASAVVTLLIHVTQTAGYTAELQAKLSSSEDSEQV
PPPSIAWNQVSGLQPFLETSLKKFLQEISQTETWQTLQPLTTTYVIYLGVYYRACSQQPS
VNPVDCLEELERLTSEVLQPLLSQPAIQSMWDLLRPCSALCNPLSCSPAPESVFSIASLS
CTGGKPPLSLVGSKSPFPFLTALLFLINSITDIHKGLTSKYSSVLGFRGLKDYLHQSWQS
GPPSVTPSSAWILRHEYHLQYFVLALARRMAGACPNYTQHASLHHCVAMALLSRLLPGSE
HLAYEVLLDLAFNPEFLPEGKAGGPEAADFSDILHLDSSAKLAQPGSVAASCSKATRGAL
LRESYQDLPSIRSCYLSHFVHLQPTLVHSQASYQGRNYLIQSMLLPEVKGPILPSDWPFF
PLISLYNRVTNAETRGAVLNSLPLDLVNTVTWNLQWVLLLETWRAKTLQSIPTAAKLARL
MCVFLTGSDLFLEAPIHRYTAALLSVYCQPKALDSLNLDAPLPGLASFHDLYISLLEQFE
AVSFGDPLFGVFVLLPLQKRFSVHLRLSLFGEHTSILKALGVPLQQIPVPLERYTSPPED
NLNLLRLYFRTLVTGALRHNWCPVLYVVAVAHVNSFIFSQDSTTQETDAARKSMLRKTWL
LVDETLKKHLLYYKLPNAESPLGFDLYEQLPPMRLRYLQTVTQKENTENATAQVS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgagaccaaagcctggggagtctgaggcagacctgctgcacttccaaaaccaa
ttcctggcagccagagcttcacctgcagtgaaggttgtgaagaaagcagacaagaggaaa
ggggagaaaaggaccacagatgctgagagacccctgctacaggacagcaaggatgtggtc
atgttggatgattttcctgatactttgccagctctaactccagctcctccaaaaaagtca
aagatcaaaagtgcctatgtccactttgaggatgaagatccagaggaaagactggagagt
catgatcgacacattacagcagtcttcagcaaaattattgaacgagacacgagtgcagca
gcagtgaccatgccagtgcccactggagacccatttccaaggacgtttcaccgctctgag
ataaaaagtgaggtgaaggtggcatctggaagaaaaagcatctttgcacaaaagatggca
gcgagaagagctgctgaaaaggcagcaacagccccctctgctgccgattgcgtgcaaata
ggatcagctgctccgaatgcccaggatcctgggggatcagcagaagaggtgcctttcctt
agcaccagggatgataaagctggtgactttttgacctctcagcagccttgtctcataacg
ggagagggtcttggaagccaaaagagtgaggaggaagttcaagctattcacaaagagaac
ttggagaagctgcagtccatgtctgaagaagagatcatgcaggagcaggaaaggcttctg
gctcagctggatcccagtttagttgctttcttaaagtcacgacgtggtggcagtgaaggc
cagaagaaggaattaaaaatggaacagaacagacaggaggagtttgtggaatctctgcct
gtggctcagcatggtgtaagatcatctctttccacacaggagtctggtctggaagaatct
gtaagggaagaagaaaatacaaaggtagaaatcacagatgatgatctgcctgtgaagccc
aagaaggaatggattcacatggacaatgtggagtttgagaagctggaatggatgaaagat
ttgcccttgccccagcagaagaaaaccaaaaagggaatgcaagctcgattcagtttaaaa
ggagaattgattcctgcagatgctgatttaccaacacatctaggcctgcatcaccatgga
gaagaggcagagagggctggttattctctccaagagctctttcatttgtctcgcagccaa
gttattcaacagaggacactggctctgcaggtcttgggtcgtattgttcagaaggccagg
gctggagagtttgtttcctccttgaagggcagcattctgcgtctgctgcttgatgctggc
tttctcttcttgctgcgcttctcgctggatgatgcagtggataatgtcatggcagcagct
gttggtgctctccgggctctgctggtgtcactcgatgatgagaaatatcttgattggact
ttctcatggtaccaagggatggctgcgttcccctttgtccccagcaatgaggaggaagag
gaggaggaagatgaagaattaaatggaacagagaagtctcaagataaaaagttaaaagat
gaaaacaagccagatccagatgtggcccgatacgatgttgtaaagggacttctgaagaca
cggatccagcaccggctgagatacatcctggaggtggtacgacctgttccaacagtagtc
ctagatatactgcacatcctcacccacatagcaaggcactcttctgaagcatgcagccag
ctgcttgactgtcctcggttgattgagaccattgtcagggaatttctccctactcagtgg
gatccccaagtggctgaaccagggtgtctgctcaccagtctccatggagttgcctgtgcc
actgctatgaaattcatcagagtgttggcaggtggaggccgcaatgcaacagccaggctg
cttaacaaatttgaaatgaaaagtcggttaagtcgctttatagctgaagacccagtggac
ttgctgctgccaagggaagaagccatcaggctaagcactgaagccttccggttgtgggct
gtggctgctgcttatggtcaggcctgtgatctttacagggatctctaccctgtgctggtg
aggatactgcagtccctgcctgagctgctcagcacttgcagtgagaagagccctctggct
gagttgtgtgtccagcgagcgtcggcagtagttactctgctgatacatgtgacacaaaca
gcaggctacacagcagagctgcaggccaagctgagcagctcagaagatagtgaacaggtt
ccacctccttccatagcctggaatcaagtgtcgggattacagcccttccttgagaccagt
ctgaaaaaattcctccaggagatatcccagacagaaacttggcaaactctccagcctctg
accacaacttatgtcatctacttgggagtttattacagagcttgtagccagcagccatca
gtcaatccagttgactgcttagaggaactggaacgtttgacatctgaggtgctgcagccc
cttctcagccaaccagccatacagagcatgtgggacttgctcaggccatgttctgctttg
tgcaaccctctgtcctgttccccagcaccagaatctgttttcagcattgcatctctgagt
tgcactggaggcaaacctcctttgagcctggttggctccaagtcacctttccccttcctc
actgccctcctgtttctcatcaacagcatcactgacattcacaagggcctgaccagcaag
tacagctccgtgctgggcttcagaggcttgaaggattatctgcatcaaagctggcagagt
gggcctccctctgtaactccttcatctgcatggatcctgcgccatgaatatcatctgcag
tattttgtgctagcattggctcggagaatggcaggtgcttgtccgaattacacccagcat
gcctcactccatcactgtgttgccatggcattgctaagccgtctgttgccagggagtgag
catctggcttacgaggtcctactggatcttgcctttaatccagagtttcttcctgaaggg
aaagctggagggccagaagcagctgacttctctgatatcctacatctggatagcagtgcc
aaactggcacagcctggctctgtggcagcatcttgttcaaaggctactcgtggtgccctg
ctgagagaatcataccaggatctaccttccatccgctcctgctacctttctcattttgtc
cacttgcagcctaccctcgtgcattcccaagcatcctaccaaggacggaattatctcatc
cagtcaatgctgcttcctgaggtcaaagggcccatcctgccttcagactggccgttcttt
ccacttatcagcctttacaacagagtgactaatgcagagacacgtggggctgtactgaac
tctctcccacttgatcttgtcaacactgtgacctggaacctgcagtgggtcttgttgctg
gaaacctggcgtgctaaaacccttcaaagcatccctactgctgccaaacttgcacggctt
atgtgtgtattcctcacaggcagtgacctctttctagaagcaccaatccaccgctataca
gccgcccttctctctgtgtattgccagcccaaggcattggactctctaaacttggatgct
cctctccctggtttggcatccttccatgatctctacataagtctcctggagcagtttgaa
gctgtctcctttggagatccactctttggagtctttgttcttctacctctacagaagcgt
ttcagtgttcatctgcgcctctctctttttggggagcacacaagtatcctgaaggcactg
ggagtgccactccagcagatccctgtacctctcgagcgatacacttcccctcctgaggat
aacctgaacctcttgcgactctacttccgaacactcgtcactggggcgctgcgccacaac
tggtgccctgttctttatgtggtggctgtggctcatgtgaacagctttattttctcccaa
gacagcacaacacaggagacggatgctgctcggaaaagcatgctgcggaagacgtggctg
ttggtggatgagaccttgaaaaagcacctactctactacaaactgccaaatgcagaaagc
cctttgggatttgacctttatgagcagctcccccccatgcgactgaggtacctgcagacg
gtgacacagaaggaaaatacggagaatgcaacagcacaagtctcgtag
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