Nestor notabilis (Kea): 104413002
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Entry
104413002 CDS
T08494
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt04382
Cornified envelope formation
nnt04510
Focal adhesion
nnt04512
ECM-receptor interaction
nnt04518
Integrin signaling
nnt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104413002 (COL4A4)
04518 Integrin signaling
104413002 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104413002 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104413002 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104413002 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nnt04147
]
104413002 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
nnt00536
]
104413002 (COL4A4)
Exosome [BR:
nnt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104413002 (COL4A4)
Glycosaminoglycan binding proteins [BR:
nnt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104413002 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104413002
NCBI-ProteinID:
XP_010022184
LinkDB
All DBs
Position
Unknown
AA seq
1631 aa
AA seq
DB search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NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcatttgaacggattaagtggcttattgcagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatatgcatatattgaccca
tgtggggggcaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccgattgggcccttggggtctacaggaccagctggt
ctaccaggggaaaaaggacagagaggtgagactgggcaacctgggccagctggagaaaga
ggtgataagggcccaactggagttccaggatttcctggtttagctggcattcagggatta
ccaggaagtggaggacccaggggcaaggctggtttagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaaatggttatattggaccacgtggtccttatggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtatgtttcacattttggaaaaggacctccg
ggagacagaggtgatcctggaccccccggcatgcctggacctatagggtcgagaggtaca
atgggcgcatctggatacccaggccaaccaggcttgcctggtattccaggttaccccggt
ttgccaggtgaacagggaaatccaggtattggagtggatggtcaaaagggggaaccgggt
gacattggacttccagggccacctgggtcaccactgttagttggacctcctggagctcat
ctgttcaaaggagaaaagggccaaaaaggactacctggggtaacaggacacagagggcca
cgtggacccaaaggtatactggggagaggagaaaaaggtgaaaaaggcattcctgggttc
cctggattgcggggtgatcctggttcttacggacctgcaggttctcctggaatgaagggg
gatccaggagaaaaaggccccccaggtcctcctggagctgttgaaactccgctgcttcct
ataaaaggtccacaaggagatcctggatttccgggtcctgctggtgatatagggtcagtt
ggaccaattgggcctgcaggcctgctgggaagaccaggacatgatggaacaagtctgcct
ggcctgccaggagtaagtggggcaccaggacctcaaggttttcaaggtgaccctggttct
cctggaacaggtgaatcaatcccaggaagatctggatttcctggaccaccaggcctacca
ggacagccaggaagacaaggcttacctggaccacctggtgtaatctgtactgagagagga
atccctggagaacctggaacaaaaggtcagatgggccttccaggaagaaaaggggaaaaa
ggagaaaagggaaatcgaggcctctgctcatgcagagctggtcctcctggtccacgtggt
gtgcaaggacttccaggtactcaaggaaggaaaggacatatgggataccctggaagagat
ggagaaaagggtgacccaggcttatctggtgcaatggggtcaccagggctccctgggacg
cctggttctgctggacaacatggtgaaaaaggagagaagggtgatccaggaagagttaga
ataaaaggaacaaagggtgacagaggtcctactggggttccaggacttccaggtcaaaga
ggcaatgatggcagagatggggaactaggattgcctggagaaaaaggagctaagggtgat
tctggagtaccactaccaggtgataaaggattccctggggtcccaggccttcctgggtta
aaagggcaaatgggattgcctggattggggtttcctggccctccaggagtcagaggaagc
catggagactttggtgatactggtaatattgggccacctggtccaaagggccagaaaggt
gagactgtctgcattacattaccataccctggaaatccaggtcccccaggttttaaaggc
attcaaggaccaaagggtttaaaaggacttcctggacatcctggaccaaatggctttgat
gggcaaaaaggtcatcgaggcaggccaggagcaggaatccctgggccagaaggctttcga
ggcaaagctggtgatcctggtgatgaaggtgaaagaggatctacagtcgatggtaaaaat
ggccctccaggtccacgtggcatagatggtcagaaaggtgttgcaggtgataccacatat
ggtcctccaggaatcccaggcaacaggggactgccaggaccccctggtgcacaaggagca
aggggtgatccaggcatttctggacttcaaggacagcctggtaccccagggtttccaggt
gccaaaggttttagaggcccagaaggtgatataggagcaccaggttgcccaggattccct
ggtccaccatgtgacacgggcttaccagggccaccaggactcagaggtgtcatgggcctg
ccaggacctcaaggcttaccaggctttaaaggtcagaggggagacaggggcctagctggg
ccacctggcatcaaaggtctcaagggctctcctggctcacaaggtcccccaggtcctcca
ggttcccgaggacttccaggacttccaggcaataaaggaccacctggttttccaggacaa
acaggaagcaaagggattcaaggaccccaaggattcccaggactcccaggaacacaaggc
ccaataggactctctggtgttaaaggagaagaaggagaaatgggtccacctgggcctagt
ggagaatgtggggatatgggaataaaaggtgaaagagggcctccaggagacagtggctgt
gttaacatccatcttgagaaaggacaaaagggggaaccggggtttcctggtgaggatgga
tttagaggcgaaagaggtgaaaaaggcaataccggtttcagaggcaccccaggatttcca
gggaagaatggtgtcccaggactgccaggtgaccatggtgacactggactgatggggttt
ccaggatctcagggtttcccaggaccaaagggctttaaaggaattataggttttcaagga
caaccaggtgaccagggtgaccttggcttaccaggaatccctggcaatccaggactgact
ggcccaaaaggatccaaaggtctctgtggattcccaggagagaagggttcaccaggtatc
caagggcaaccgggaagaccaggatccaagggtgaacctggacacccaggaatacctgga
cttccaggtcctcagggattgccaggagaacctggagaaaaagggaaacatggaattttg
ggatctccaggactgcaaggattacctggattccaaggtcttcctggactgcccggactg
gatggcttggatggactaaaaggccaaaaaggttctgcaggagctccaggtcaaagtgaa
acagggcccccaggatactcaggagagcttggaccaaaaggacagagaggtgaacctgga
tggcctggtatttctattccaggccctcctggagaaagaggattcccaggattaccaggt
agaagaggacctgttggacccactggacctatgggaagatctcctgatagtgcttctcct
ggtcctccaggtgatcaaggaccacctggtttagatggcatcagaggtcagcctgggaaa
cctggtcctcctggagagactatctttgtgcgaggagatccaggtgatatcggccttcgg
ggggcaccaggtaaccctgggcagcgaggacgacaaggagccagaggtcttccagggaac
caaggaagaggaggcctaaagggtcctatgggaagccatggcccacaaggtccacctggt
gctacaggacaaccaggagatgaaggttttcaaggaaaacctggtccgagaggtcccaca
ggtattcaaggtgaccctggtgaaccaggaaaaacagatgattcatgccctaccatccca
gggcctcctggggaagcagggcaaagaggagaagatggctctgtgggattaccggggcca
ataggccatcctggacctccagaaaaaggtgaagaagggtcatgtagcctgccaggtcga
gatggcttacctggggtacctggacctccaggtgaccaagggcatataggacagcaagga
tatgctgggccacgaggtccacctggccagactggcatcccagggccaccaggcccccat
atcagatctgcaagtggattcttactcgtccttcacagtcagtcagacagagaaccactc
tgtccgcaagggatgccaaaattatggactggctatagtctgctgtacctggaaggacaa
gagaaagctcataatcaagatcttggtctggcaggatcttgtcttcctgtgtttaatacc
atgccatttgcttactgtaatatcaaccaagtttgttattacgccagtcgaaacgataag
tcttactggttggcgagtgctgctcctttaccaatgacaccactgtctgaagaagaaata
caaccatatataagcagatgtgctgtatgtgaggccccagcccaagcagtagcagttcac
agccaagatcagtcaattcctccctgcccggagaactggaggagtctttggataggatat
tcctttttgatgcacactggatctggtgatcagggtggtggacagtcccttatgtcacct
ggaagttgcctagaagacttcagatcagcaccattcattgaatgccagggtcagcgggga
acatgccaattttttgctaacgaatacagtttctggttaacaactgtggtacctgaattg
cagtttgcatcagctcccctatcaggaactcttaaagaaggacaagagcagaggagaaaa
accagtagatgccaagtatgcctgaagcatggctaa
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integrated database retrieval system
