Nestor notabilis (Kea): 104413383
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Entry
104413383 CDS
T08494
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
nnt
Nestor notabilis (Kea)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
CBM_4_9
DUF4998
Motif
Other DBs
NCBI-GeneID:
104413383
NCBI-ProteinID:
XP_010022659
LinkDB
All DBs
Position
Unknown
AA seq
1477 aa
AA seq
DB search
MLIHTCFFLACLPVVSHVWGHAGQGSGRLKLTVLSEDRLQMKWKETEGYISGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGAASGKNLTSLGNPAAEHSGVAEATPPPLHTVLAQPAKNRAEKKRQKGIQPKGS
GETTRNQPGVDTSVTGATPTTTKSSQRTPASPERXXXXXXXXXXXKEKPTKDSLRRGSQF
QCDTSAMTDIVLLVDGSWSIGRSNFKLIKEFLSNLISPFTIGQDKIRVGLSQYSSDPRTE
WDLSTYSTRDQVLEAVRGLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDG
KSQDDANLAAQTLKNLGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVGK
LTRVLCTRLREKSSRENTGSAVGESPVDSGPQLSPTDLKISAVTSKSMHLTWSPPLRPPK
TYRIVYYPSKGGIPREVILDGTVSSLQLSNLTSHTEYLVSVIPVYDTAVGDGLRGVTSTL
PLSSPRSLRVSELSHNSMRLSWKAAQGATQYLVLCSAVPDGAEDYTMEVKVSQPEVLLDG
LSPSTEYSIAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVR
AHHVSYVSSRGSNAGEVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTL
KVPPPRALKVTELSGNSLRLQWEAVAASDVVVYQIKWSMASGEQPQELSIAGNVATAVLP
GLQKNTDYKISIWAYYKDGARSDTVSVQHRTNSRSPPTNLFIDSETPTSLQVHWTPPDGR
VQHYKITYHPVSDAGAQQTIIASGKSSNVTLQPLLPDRAYKVTISAIHYTGESEITSTTG
RTAPVLSKFPSIRGFIPSKAEACPTISSTKGSVRGFDMMEAFGLVEKEYASVKGVAMEPF
IFSGSRTFTLFRDTQLTQRTSDIHLFAIPPDHTISFLLRLLPDTPKEPFAVWQITDEDFQ
PLLGVNLDPSRKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLD
CKKIAEKPINTVGSISTAGFIMLGKVTRTRGPRSGSAPLQLQSLQITCSSTGAEEDRCCD
LPALRDEESCPSLAPACSCSSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQV
GPEGPSGQQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGLQGIPGVQGAPGRDGLQGAKG
VRGLEGTAGPPGPPGPRGFQGVTGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLA
TIYQLVSQACERMIQTHVLKFDSFIHEHARKPVPIWEERLKPGEPGPPGPPGPPGSNGER
GENGIPGQPGKDGYPGERGAPGPKGEKGMSGASEEGIQGPRGRTGPPGEVVLGKPGPKGY
PGNVGPQGFPGVRGQPGQSGYPGGCDISGCYGAERRD
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttgtttctttcttgcctgcctgcctgtggtgagccacgtctggggt
catgcgggacaagggtcaggccggctgaaactcactgtcctttcagaagacaggctccag
atgaaatggaaagagactgaagggtacatcagtggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactccaaaagccacagtgggg
gggctgagccctaccaaggaatacacgctgcaggtctacgtgctcaatggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggaactcaaaaacgcgtcccagactagg
aataaccgaaggaactcaggagctgcgtcaggaaagaacctcacctctttggggaaccca
gcagctgagcacagtggggtggcagaggccaccccaccacccctgcacactgtcttggca
cagccagcaaagaacagagctgagaagaaaaggcagaaggggattcagccaaagggctcg
ggagaaacaacaagaaaccagcctggtgtggacaccagtgtgacaggagcaacaccaacc
accacaaagtcatcccagcgcactcctgcaagcccggagagggannnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnaaagagaaacccacaaaggattcattgaggagaggctcccagttt
cagtgcgatacatctgcaatgactgatattgtcctgcttgtggatggatcctggagcatc
ggccgcagcaacttcaagctcattaaggagtttctgagcaatttgatttccccattcact
attggccaagacaagataagagtagggctgtcccagtacagcagcgatccccgcacagag
tgggatctgagcacttactctacaagggaccaggttctggaggctgtgaggggtttgcgg
tacaaaggaggcaacacctttacaggtctggcactgacccacgtcctggagcagaatctg
aaaccagatgctggtgcccggctggaggctgagaagttggtgatactcctgactgatgga
aaatctcaggatgatgccaacctggctgctcagaccttgaaaaacctgggcatagagata
tttgccattggcgtgaagaacgcggacgaggcagagctgaggcaagtggcatcagagccg
ctggagctcaccgtgtacaacgtgctggacttcccgctgctgagctcgctggttggcaaa
ctcacccgggtcctgtgcaccaggctccgagagaagagcagcagggaaaacacaggcagc
gctgtgggagagagccctgtggactcgggtccccagctgagcccaactgaccttaaaata
tccgctgtgacttccaagagcatgcacttgacctggagtcctcctctgagaccaccaaag
acataccggattgtgtattacccctctaagggtggtatccccagagaggtgattttagat
ggaacagtctcctctttgcagctttccaatctgacctcgcacacggagtatctggtgtca
gtgattccagtttatgacacagctgttggggatgggctgagaggtgtcacctccacattg
cctttgtcttcccctcgctccctacgtgtctctgagctgagccacaacagcatgaggctg
agctggaaggcagcccagggagccacacagtacctggtgctctgctccgcagtccctgat
ggggcagaggactatacaatggaggtgaaggtgtcccagcctgaggtcctgctggatggg
ctgtctcccagcacagagtactccattgcagtgtatgcaatgtatggggaggacgcgagt
gatccagccagcatccaggaaaccaccctggccttgagtcctcccaggtacctgagcttc
tcggagctgagccatgcgtccgttcgggtgagctgggaggctgcgtctccagctgtgaga
gctcaccatgtcagctatgtttctagcagagggagcaacgctggcgaggtcgaggttcct
ggcaccgcaacatccactgtcctgagacctttgtcctccctcacccaatacttcatcagt
gtcagatctacctatgatgaaggggactcctttccaattactggcaatgttaccacttta
aaggtccccccgccgcgggcgctgaaggttaccgagctctctgggaacagcctccggctg
cagtgggaagctgtcgctgcctccgatgtggttgtctatcagatcaaatggagcatggcc
agtggagagcagcctcaggagctctccatcgctggaaatgtggcaactgctgtcctgcct
ggcttgcagaagaacactgactataagatatccatctgggcctattacaaagatggtgct
cgaagcgacaccgtttctgttcagcacaggaccaactcccggagcccacccaccaacctc
tttatcgactccgagacccccactagcctccaggtccactggacccctcctgatggccgc
gtacagcactacaaaattacctaccaccctgtgtctgacgctggtgctcagcaaacaatc
atagcttctggcaaaagcagcaatgtgaccctgcagccactgctgcctgaccgagcctac
aaggtgaccatttctgccatccattacacaggagagagtgagatcacatccacaacggga
cggacagctcctgtattgtctaaattcccttcaataagaggattcattccatctaaagca
gaggcctgccccaccatcagctctaccaaaggctccgtacgaggatttgatatgatggaa
gcttttggcttagtagagaaggaatatgcctccgttaaaggcgtagctatggagccattc
atattcagtggctcccgtaccttcaccctgttcagagacactcagctcacccagaggacc
agcgacatccacctctttgccatcccacccgaccacaccatcagcttcctcctgcgcctc
ctgcctgacacccccaaggagccctttgctgtgtggcaaataacagatgaggacttccag
cctctccttggtgttaaccttgaccctagtaggaaatccttgacctatttcaaccatgac
tacaaggctgatctacaggaagtctcctttgaccagcaggaagtgaagaagatattctat
gggagctttcataaggtacacgtggccgtgagccacttcaagatcaaactctatctggac
tgtaagaaaatagctgagaaacccatcaacaccgtgggcagcatctccaccgctggcttc
atcatgctggggaaagtgaccaggaccagaggacccaggagcgggtccgcaccgctccag
ctgcagtctttgcagatcacatgcagcagcacaggggcagaggaagacagatgctgtgat
ctccctgcactgagggacgaggaaagctgcccttccttagctcctgcctgctcttgttct
tctggccgccccggcttgccaggacctccagggccccctggcagccctgggaggagagga
ccacaaggtgagcagggggagccaggacccaagggtgaaccaggcccacccggacaagta
gggccagagggtcctagtggccagcaaggctctcccggctcccaaggaatcacggtgcag
ggtcctgtgggaccaccaggaattaaaggagagaaaggagacactggaagtcctggcctg
cagggcattcccggtgtgcagggagctccaggcagggatggtcttcaaggtgcaaagggg
gtgaggggactagaaggcacagcggggcctccaggacctcctggaccaaggggtttccaa
ggagtgacaggctcccgaggcagcagtggagagaagggacctccaggtgacgttggacca
acagggctgcctggtccaaaaggagaaagaggagagaaaggggaaccacagtccttggcc
acaatttaccagctcgtgagtcaagcttgtgagcggatgatccaaactcatgtgttgaaa
tttgactcattcattcatgaacatgcaaggaaaccagttcctatttgggaagaaagatta
aaaccaggagaaccaggaccaccaggtcctccaggtccccctgggagcaatggcgaaaga
ggagaaaatggcatccctggacagccaggcaaagatgggtatcctggagaaagaggtgcc
ccagggcccaaaggagaaaaagggatgtctggagccagtgaagaagggatccaaggaccc
agaggcagaacaggtccaccaggagaagttgtgctggggaaaccaggtccgaagggttat
cctgggaatgttgggcctcaaggttttcctggtgtcagagggcagcctgggcagtctgga
tatccagggggttgtgatatctctggatgttacggagcagaaaggagagattaa
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integrated database retrieval system