Nestor notabilis (Kea): 104413454
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Entry
104413454 CDS
T08494
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt04010
MAPK signaling pathway
nnt04020
Calcium signaling pathway
nnt04260
Cardiac muscle contraction
nnt04261
Adrenergic signaling in cardiomyocytes
nnt04270
Vascular smooth muscle contraction
nnt04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104413454 (CACNA1S)
04020 Calcium signaling pathway
104413454 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104413454 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
104413454 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
104413454 (CACNA1S)
04270 Vascular smooth muscle contraction
104413454 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nnt04040
]
104413454 (CACNA1S)
Ion channels [BR:
nnt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104413454 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104413454
NCBI-ProteinID:
XP_010022752
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
DDLLKDEEGDTTSSPIPLFLYCSLLIDTPSQYVLCQSCLSLLPLRPFEIIILLTIFVNCV
ALAIYLPMPEDDTNVANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAYLRNGWNVLD
FSIVSLGLITMTLEKVNAKEGGSSGGKGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSI
IKAMVPLLHIALLVLFMIIIYAIVGQELFKGRMHKTCYYLGTDVIATVGSEKPAPCTSSG
HGRHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEW
PWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLEEDLKGYMDW
ITHAEVMDSDRARGEGMMPLDEGGSETESLYEIEGMNKWILYFRQWRRWNRMFRRKCRDV
VKSKFFYWLVILLVALNTFSIASEHHLQPEWLTQVQDNANRVLLALFVAEMLLKMYALGL
RQYFMSLFNRFDCFVVCAGVLETILVELDALSPLGISVLRCIRLLRIFKITRYWTSLSNL
VASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMQVRRSTFDNFPQALISVF
QILTGEDWNSIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAE
SLTLAQKAKAEERKRRKMSRHYPEKSEDEKQILAKKLEQKAKGEEIPTTAKLKVDEFASS
VNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSFFIFSPTNKF
RMLCHRTVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGFTSVFTVEIV
LKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIESSAISVVKILRVLRVLRPLRAI
NRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTDPSKLTEKEC
RGYFINYVDGDPTQIELQQRVWLHNNFHFNNVFSAMMSLFTVSTFEGWPELLYMAIDTNA
EDTGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGENEYKNCELDKNQRQC
VQYALKARPLRCYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQHYNQSPEMNH
ISDILNVAFTILFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVILNEIDTVLAS
SGGLYCLGGGCDGTASDDDSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWTFIKSFQALP
YVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEI
LLDCSYGKLCDPESDFNEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLT
RDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRL
VCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWKRTSMKLLDQ
VIPPIGDDEVTVGKFYATFLIQEHFRKFMKHQEEYYGYRPKKNPVEIQAGLRSIEEEAAP
EIRRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPSSPLQPHVASQRPL
QFTEVGSEDLDSPVFLDDFPQEGNTNVNNANRNNRLEGMEYEDEVLRRTVPAAPKHRVWG
CNHPSPMEKLQQRPSRRRGEATSGSHPSSGLHFLSQEQPGEDDTVMGRASSSEHQQGESR
DPSASSTPAITFLIQEALISGGLTALAHDPTFIAVTRDEMAASSQLEVDEVEKAAVELLK
GRETLQGTKTGSAPEDTSATSPASSPGLTAATSRKTIAATRL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
gacgatttgctgaaggatgaggagggggacaccaccagctctcccatccccttgttcctc
tactgcagtcttttgattgataccccctcccaatatgtcctgtgccaaagctgcctctct
ctgcttcctcttagacccttcgagatcatcatcctcctgaccatatttgtgaactgtgtt
gcactggccatctacctgccgatgcctgaagatgacaccaacgttgccaactccagcctg
gagaagattgaatatgccttcctgatcttctttgccattgaggccatgctcaagataatt
gcctatgggtttcttttccatacggatgcgtatctccggaatggctggaatgtgctcgac
ttttccatcgtgtctctagggcttatcacgatgaccctggagaaggtcaacgcaaaagag
ggggggtcttcaggaggaaaaggcggctttgatgtgaaggccctgcgagcatttcgtgtg
ctgagacccctgcgcctggtgtctggagtgccaagccttcaggtcgtcctgaactccatc
atcaaggctatggtgcccctgctccacatcgccctgctggtcctcttcatgatcatcatt
tatgccattgtcgggcaagagctcttcaagggcaggatgcacaagacctgctactacctc
gggacagatgtgattgccacggtgggatcagagaagccagccccatgcaccagctctggc
catgggcgccactgcaccatcaatggcaccgagtgccgaagcgggtggccggggcccaac
aacggcatcactcactttgacaacttcggctttgccatgctgactgtctatcagtgcatc
accatggagggctggacagaagtcctctactgggtaaatgatgccattgggaatgaatgg
ccctggatctactttgtcagccttatcttgcttggctccttctttgttctcaacctggtg
ctaggggtgctcagtggtgagttcaccaaagagcgtgagaaggccaagtcacgcggcacg
tttcagaagctgcgggagaagcagcagctggaggaggatctcaagggctacatggactgg
atcacccacgctgaggtcatggacagtgaccgggccaggggagaaggtatgatgccattg
gatgaaggagggtcagagacagagagcttgtatgaaattgagggcatgaacaagtggatt
ctctacttccgtcagtggaggcgttggaaccgaatgtttcgtaggaagtgcagagatgtg
gtgaagtccaagttcttctactggcttgtcatcctgctggtggccctgaacaccttctcc
attgcctccgagcaccacttacagccagaatggctgacacaagtacaagacaatgccaac
cgggtgctgctggccctctttgtggctgagatgctgctgaagatgtatgcgctgggtctg
cgccagtacttcatgtcgctcttcaaccgctttgactgcttcgtggtgtgtgcgggggtc
ctggagaccatcctggtggagctcgatgccttgtcacccctgggcatctctgtgctgcgc
tgcatccggcttctccgcatcttcaagatcaccaggtactggacatccctgagcaacctg
gttgcctccctgctcaactcagtccgctctattgcctccttgctcctccttctcttcctc
ttcatcattgtcttcgcactgctgggtatgcagctctttgggggcaagtttgactttgag
gacatgcaagtgcggcgcagcacattcgacaacttcccccaggccctcatcagtgtcttc
cagatcctgaccggggaggactggaattcaatcatgtacgatggaatcatggcctacggg
gggccgtcctttcctggcatgctggtctgcatctacttcatcatcctcttcgtttgtggg
aactatatcctcctcaatgtcttcttggccattgcagttgataatttggctgaggctgag
agcctgaccttagcccagaaggctaaagcagaggaacgcaagcggcggaagatgtccaga
cattacccagagaagtctgaagatgagaagcagatactggcaaagaagcttgagcagaaa
gcaaagggagaagaaattcccacaacagccaagttaaaagtggatgaatttgcatccagc
gtcaatgagatcaaagacccctacccttctgctgacttcccaggtgacgatgaggaagat
gagccagaaattcccctgagccctcggccacgtccccttgcggagctacagctgaaagag
aaggcggtgcccatgcctgaagccagctccttcttcatcttcagcccaaccaacaagttt
cggatgctgtgccacaggactgtcaatgctacctggttcaccaacttcatcctgctcttc
attctcctcagcagcatctcgttggcagctgaggatcccatccgtgctgagtccttccgc
aaccagatccttggatactttgacattggtttcacctctgtcttcacagttgaaattgtc
ttgaagatgacagcttatggtgctttcctgcataaaggctccttctgcaggaactcattc
aatatcctggacttgctcgtggtcgctgtgtccctcatctccatgggaattgagtccagt
gccatctcagtggtgaagatcctccgggtgctgagggtactgaggcctctgcgagccatt
aacagggcaaaggggctgaagcacgtggtccagtgcgtgttcgtggccatcaagactatc
ggtaacattgtggtcgtcacgacattgctgcagttcatgtttgcctgcattggggtccag
ctcttcaagggcaagttctatagatgcacagatccatccaagctgacggagaaggagtgc
aggggttacttcatcaactacgtggacggggaccccacgcagattgagctgcaacagcgt
gtctggttgcacaacaacttccacttcaacaacgtattctcagccatgatgtcccttttc
actgtctccaccttcgagggctggccagagctgctatacatggccattgacactaatgct
gaggatacaggccccatctacaactaccgggtggagattgcaatgttcttcatcatctac
atcatcctcattgccttcttcatgatgaatatctttgtgggctttgtcattgtcaccttc
caggagcaaggggagaatgaatacaagaactgtgagctggacaagaatcagcgccagtgt
gtgcagtatgcgctgaaggctcgcccgctgcggtgctacatccccaagaacccctaccag
taccagatctggtatgtggtcacctcctcctactttgagtacctcatgttcttcctgatc
ctgctcaacaccatctgcctgggcatgcagcattacaaccagtctccagaaatgaaccat
atttcagacatcctcaacgtggccttcaccattctcttcaccctggagatgatcctcaag
ctcatggcttttaaagccaagggctactttggggacccctggaacgtctttgacttcctc
atagtgattggcagcatcattgatgtcatcctcaacgagattgacactgttcttgcatcc
agtggtggattgtactgcctcggtggaggctgcgatggcactgcctccgacgacgactcc
cgcgtctccatcactttcttccgtctgttccgcgtgatgcggctggtgaagctgctgagc
cgaggggaaggtgtcaggaccctcctctggaccttcatcaagtcctttcaggctctgccc
tatgtagccctgctgattgtgatgctttttttcatctatgctgtgattgggatgcagatg
tttgggaagattgccatggtggacgggacccagatcaaccggaacaacaacttccaaacc
ttcccacaggctgttctgctgcttttcaggtgtgccactggtgaggcctggcaggagatc
ctgctggactgcagctatggcaagctctgtgaccctgagtcagacttcaacgagggcgag
gagtacacctgcggcaccggctttgcctacttctacttcatcagcttctacatgctctgt
gccttcctgatcatcaacctcttcgtggccgtcatcatggacaacttcgactacctcaca
cgtgactggtccattcttgggccccatcacctggatgagttcaaacggatctgggctgag
tacgaccccgaggccaagggcagaatcaaacacttggacgtagtgactctgctgagacgt
atccagcctcccctgggctttgggaagttctgtccacaccgtgtagcgtgtaagcgtctg
gtgtgcatgaacatgcccctcaacagcgatggcactgtcaccttcaatgcaaccctcttt
gcactggtgaggacagccctcaagatcaagacagaaggtaactttgagcaggccaacgag
gagctcagagccattatcaaaaagatctggaagcgaaccagtatgaagctcttggaccag
gtcatcccacctattggagatgatgaggtgacagtgggcaaattctatgctactttcctc
atccaagagcatttcaggaagttcatgaagcaccaggaggagtattatgggtaccggccc
aagaagaaccctgtggagatccaggctgggctgaggagcattgaagaagaagctgctcct
gaaatccgtcgggccatttctggggacctgactgctgaagaggagctggaaagagcaatg
gtggaggccgccatggaggaagggatatacaggaggactggtggcttgtttggccaagtc
gacagcttcctggagcccagcagccccctgcagccacacgtggccagccagaggcccctg
cagttcaccgaggtgggcagcgaggacctcgattcccctgtgttcctcgatgacttccct
caggaaggcaacaccaatgtcaacaatgccaacagaaacaacaggctggaggggatggag
tacgaggatgaggtactgaggaggacagtgccagcagcacccaagcatcgagtgtggggc
tgcaaccacccctcacccatggaaaagctgcagcagaggccgagcaggaggcgaggagag
gccacctctgggagtcacccatcatcaggcctgcactttctctcccaagagcagcccgga
gaggatgacacagtgatgggaagagcatccagctcagagcaccagcagggtgaaagcaga
gacccgagtgcatcctccaccccagccatcaccttcctcattcaggaggctctgatctct
gggggcctcacagctctggcccatgacccaaccttcatagcagtgacaagggacgagatg
gcagccagcagccaactggaggtggatgaagtggagaaagcagctgtggagctgttaaag
ggaagagaaacacttcagggtaccaaaactggctctgcccccgaggacacctcagccaca
tcaccagccagctccccagggctcacagcagccacttcccgaaagaccattgctgccact
cgcctgtga
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