Nelumbo nucifera (sacred lotus): 104585774
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Entry
104585774 CDS
T04131
Name
(RefSeq) endoribonuclease Dicer homolog 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104585774
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104585774
microRNA pathway
RISC loading complex
104585774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
DND1_DSRM
Helicase_C
PAZ
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104585774
NCBI-ProteinID:
XP_010241057
UniProt:
A0A822XGW7
A0A1U7Z312
LinkDB
All DBs
Position
Un
AA seq
2035 aa
AA seq
DB search
MEEARVFESIGGQGTRSPDNVKSSYWLDACEDMPCDLISDFVDFDSVAPEAVDDSSLSQG
ADACFFGGIDKILDSIKNGCGLQPPVCDPIATGQGVNDSFVGEVRPENVVYGDSKMRVEE
SFNATVEEDSPLRRARRIECNRSSTDANRRCGSHSSTKRFDGSEHWEETYSKDDGVQRRE
SRDSEVRKENGFRRHEENRDGEARRDNGVRRHGGRDSEVRRDNGVLRHGSRDSETVSRDG
GVDNSERCNKWLRLNYCSEGRDYSVSRHDLPRERSSRKRLRDREEIERRDRDRGSKRERY
CSDKRDFRDRDWRERERRGYWERDRSGKVIFHVGSWEAEYNRELKRAKEENPGPIETVEK
KTDEKKEKPAEEQARKYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSVCNNLLRENK
KMLAIFLVPKVPLVYQQAEVIRERTGYKVGHYCGEMGQDFWDARRWQREFESKQVLVMTA
QILLNILRHSIIKMESIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASP
VNLKGVSSQEDCAIKIRNLESKLDSIVCTIKDRRELEKHVPMPSEVVVEYDKAASLWSLH
EQIKQMELAVEEAAHSSSRRSKWQFMGARDAGAKEELRLVYGVSERTESDGAANLIQKLR
AINYALGELGQWCAYKVAHSFLMALQNDERANYQLDVKFQESYLNRVVSLLQCQLSEGAV
SDKDAKGADGENGNVQYGGDPDEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQS
LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEMRTCQ
MQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY
ILMVERGNLSHETFLRNARNSEETLRKEAIERTDLSHLKGTSRLTSMDAIPGSVYQVEST
GAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGSTEYSCKLQLPCNAPFEK
LEGPLCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTA
RHREFYPEGVADILWGDWILTGKDVCDNLKLIHLYIYAVKCVNVGASKDPFLTQVSDFAV
LFGNELDAEVLSMSMDLFVARTMITKASLVYRGPIDITETQLVSLKSFHVRLMSIVLDVD
VQPSTTPWDPAKAYLFVPVVDKICHDPIKEIDWDLVENIISTDAWSNPLQRARPDVYLGT
NERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMENLDE
DVTQGKLFMADSCIDAESLVGRIVTAAHSGKRFYVDSVRYDMNAENSFPRKEGYLGPLEY
SSYADYYRQKYGVELIYKKQPLIRGRGVSYCKNLLSPRFEHSEACESESDEALDKTYYVF
LPPELCFVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDMINYPVLASKILEALTAASC
QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQ
SYIQADRFAPSRWAAPGVLPVFDEDTKEAEVSFFEKDVTPPEVEPGKSLCGDSYEDDEME
DGEVESDSSCYRVLSSKTLADVVEALIGVYYVEGGKQAANHLMKWIGIQVEFDPKEIESS
NKPRAIPESILRSVNFEALEGALNIKFKDRGLLVESITHASRPSSGVSCYQRLEFVGDAV
LDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHLHLRHGSSALEAQIRD
FVNDVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGGDTSVVWRVFQPLLHP
MVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVYIDGVQVGIAQNPQKKMAQ
KLAARNALIVLKDEETSKAKKGEENGKKKNGTQTFTRQTLNDICLRRQWPMPQYRCVNEG
GPAHAKRFTYSVRVNTTDRGWTDDCVGEPMPSVKKAKDSAAVLLLELLNKWYPHS
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctagggtttttgagagcattggcggccaagggactaggtccccggacaat
gttaagtcttcttactggcttgatgcttgtgaggatatgccatgtgaccttatcagtgac
ttcgttgattttgattcggttgcccccgaagcagtcgacgattcttctttgagccagggt
gctgatgcctgtttctttgggggaatcgataagattcttgatagcataaaaaatggttgt
ggtttacagcctcctgtttgcgacccgatcgcaactggtcaaggagttaatgatagtttt
gtcggagaagttcgaccagagaacgtagtgtatggggactccaaaatgcgagtagaggag
tccttcaatgccacggttgaagaggatagtcctttaagaagagcacggcggattgagtgt
aatcgaagtagtactgacgctaataggcgttgcggatctcacagttccactaagcgtttt
gatggttcagaacattgggaggaaacgtactcaaaggacgatggggttcaaaggcgtgaa
agtagggatagcgaggttaggaaagagaatggattccgaaggcatgaagaaaatcgagat
ggtgaggctaggagagacaatggcgtgcgaaggcatggtggtcgggatagtgaggtcagg
agagacaatggcgtgctaaggcatggaagtcgggatagcgagactgttagtagagatgga
ggcgttgacaattcagaaagatgcaacaaatggcttcgtcttaactactgtagtgagggg
agggattattcagtcagccgccatgatctcccaagggagcgttcaagcaggaagaggctc
cgagatcgtgaagagattgaaaggcgtgatagggatcggggcagtaaaagggagcgctac
tgtagtgataagagagactttagggatcgggattggagggagagagaaagaagaggttac
tgggagagggatcgatctggcaaggtcatttttcatgttggttcttgggaggctgagtac
aacagggagttgaagagagccaaggaagaaaaccctggtccaattgagactgttgagaaa
aaaactgatgagaagaaggagaaaccagctgaagagcaggccaggaagtatcagttggat
gttctggaacaggcaaagaagaagaatacaatagcttttcttgaaacaggagcaggaaaa
actctcatagctgttctccttatcaagagtgtttgcaacaatcttcttagggaaaataag
aaaatgctagcaatatttttggtacccaaggttccacttgtatatcagcaagctgaagtt
attcgtgagagaactggttacaaagtggggcattattgcggtgagatgggtcaagatttc
tgggatgctcgtaggtggcagcgtgaatttgaatcaaaacaggttctggtaatgacagct
caaattcttttgaacattctcaggcatagtataatcaagatggaatccattcatctcctt
attttggatgagtgccatcatgctgtgaagaaacatccatattcactagtgatgtctgag
ttctatcataccactccaaaggaaaagagacctgctgtttttggaatgacggcttctcct
gtcaacttgaagggtgtttccagccaagaggattgtgcaataaaaattcggaatcttgaa
agtaaattagattctatagtttgtacaataaaagaccggagagagctggaaaaacatgtt
cctatgccatcagaagttgtggtggagtatgacaaagcagctagcttgtggtcccttcat
gaacagataaaacaaatggaattagctgttgaagaagctgcacattcaagttccagaaga
agtaaatggcaatttatgggggccagagatgctggagcaaaagaagagctgcgccttgtt
tatggtgtttctgaaagaactgaaagcgatggagctgctaatttaattcagaaactgagg
gctattaactatgctttgggagagttaggacagtggtgtgcttacaaggttgcccattca
tttttaatggccttacagaatgatgaaagggcaaactatcagcttgatgtgaagtttcaa
gagtcctacttgaatagagtagtttctctcttacaatgccagttatctgagggagctgta
tctgacaaggatgctaaaggtgcagatggagagaatggtaatgttcaatatgggggtgat
cctgatgaaattgaagaaggggagcttcctgatagtcatgttgtctctggtggagagcat
gtggatgtgataattggagcagcagtagctgatggaaaagtgacaccaaaagtgcaatca
ttgattaaaattcttctaaagtatcagcacacagaggatttccgtgcaatcatttttgtg
gagagagttgtggctgcattagttcttccaaaggtttttgcagagcttccatctcttagt
tttatcaaatgtgcaagcttgattggacataacaatagtcaggaaatgcgtacttgtcaa
atgcaggatacaattgcaaaattccgtgatggtcgagtgacattattagtggccactagt
gtagcggaagaagggttggatattcggcaatgcaatgttgtcattcggtttgatcttgca
aagacagttttggcatacattcagtccaggggccgtgcaaggaagcccgggtctgattac
attttgatggttgagaggggaaatttatcacatgaaacttttctgagaaatgcacggaat
agtgaggaaacattgcgaaaggaagccatagagagaactgaccttagccatcttaagggt
acttcaaggttaacatcaatggatgcaataccaggttcagtgtatcaggtggagtcaact
ggtgctattgtgagcctgaactctgctgtcggactaatacatttttactgctcacagctc
cctagtgacaggtattcaatacttcgtcctgagtttattatggagagacacgagaagcca
ggtggttccaccgagtattcatgcaaacttcaacttccctgtaatgcaccctttgaaaag
cttgagggtcctttatgcagttcaatgcgactagcacaacaggctgtatgtttggctgcc
tgcaagaagctgcatgagatgggggcttttactgacatgctcttaccagacaagggaagt
ggggaggaaggtgagaaggttgaccagaatgatgaaggagatcctctccctggaactgca
aggcatagagaattctatcctgaaggcgttgctgatattctttggggagattggattttg
actggtaaagatgtctgcgataacttgaaattgattcacctgtatatatatgctgtgaag
tgtgtaaacgttggcgcttcaaaagatccttttttgactcaagtttcagattttgcagta
ctttttggcaatgagctggatgcagaggttttatcgatgtcgatggatctctttgttgct
cgaactatgataacaaaggcatccctcgtctataggggacctatagatattacagaaacc
cagctggtttctctgaaaagttttcatgttagactcatgagcattgttctagatgtggat
gttcaaccctctaccactccctgggatcctgcaaaggcatatttatttgttcctgttgtt
gacaagatatgtcatgatcctataaaagaaattgactgggatctggttgaaaatataata
agtacagatgcatggagcaatccccttcagagggctcgtccggatgtttaccttggtaca
aatgaacgaacgctaggtggagaccgtagagaatatggatttgggaaactgcggcatggt
atggcttttggccagaaatcccatcccacctatggaattagaggagctgttgcacaattt
gatgttgtcaaagcttctggattagttcctaatcgggatgctatggaaaaccttgatgag
gatgttacccaaggcaaattgttcatggctgattcatgcattgatgcagaatctttagtg
gggaggattgtcactgcagctcactcagggaagaggttctatgtggattctgtgcgctat
gatatgaatgctgaaaattcattccctaggaaagagggttatttaggtccactggagtat
agttcatatgctgactactacaggcaaaagtatggagtagagttgatatataagaagcaa
cctctaataagaggacgtggcgtctcatattgcaaaaatcttctctcccctcgatttgag
cattctgaagcatgtgaaagtgaatctgatgaggctcttgataaaacatactatgtgttc
ttgcctcctgaactatgttttgtacatccacttccgggttcacttgttagaggtgctcag
aggttgccctcaataatgaggagagttgaaagtatgcttttggcagttcaattgaaggat
atgatcaattatcctgttcttgcttcaaagatcttggaggctttgactgctgcctcatgt
caggagaccttctgctatgaaagagcagaacttttaggagatgcttacctcaagtgggtt
gttagcagattcctttttcttaaatacccccagaaacacgagggtcagcttactaggatg
aggcagcaaatggtcagtaacatggtactctaccagtatgctctaaataaaggactccag
tcatatattcaagccgatcgttttgctccatcaagatgggctgctcctggtgtgttacct
gtatttgatgaggacaccaaggaagcagaagtatcgttctttgagaaggatgttacacca
cctgaggttgaaccaggaaaaagcttgtgtggtgattcatatgaagatgatgaaatggag
gatggtgaagttgagagtgattcaagttgctatagagtcctctctagcaaaacattggct
gatgttgttgaagcattgataggagtatattatgttgaaggtgggaagcaagctgcaaat
cacctaatgaaatggattggaattcaggtggagtttgatcctaaagagatagaaagctca
aacaagccacgtgctatcccagaaagcatactcaggagtgtcaattttgaagccctggaa
ggtgccttaaatattaaatttaaagatagaggtttgttggttgaatccattactcatgct
tcacgcccttcatcgggagtttcctgttatcaacgcctagagtttgttggtgatgctgtt
ctggatcatttgattacaaggcacttgttcttcacatacactgatctaccaccaggccgc
ttgactgacttgcgtgctgctgctgtaaacaacgaaaactttgcacgtgttgcagttaag
cacaagctccatctgcaccttcggcacggatcaagtgcccttgaagctcagattcgggac
ttcgtaaatgatgtccaagatgaattgttaaagccagggttcaactcttttggcttggga
gattgtaaagctcccaaggtacttggtgatattgttgaatccattgctggtgccattttt
cttgatagtggaggggatacttctgtcgtgtggagagttttccaaccgttgttgcatcca
atggtaactccagaaacccttccaatgcatcctgtcagagaactgcaagagcgatgccag
caacaggctgaagggttggaatacaaagccactcgaagtggcaatctggctactgttgaa
gtctacattgatggtgttcaggttggaattgctcagaacccacagaagaagatggcacag
aaattagctgcaaggaatgcgctcattgtattgaaagacgaggaaacatccaaagctaag
aagggtgaagagaatggaaagaaaaagaacggcactcaaacattcactagacagacattg
aatgacatatgcttgcggaggcagtggccgatgcctcaatatcggtgtgtaaatgaaggt
ggtcctgcacatgcaaagaggtttacatattctgttcgtgtgaatactactgataggggg
tggacagatgattgcgttggggaacccatgccaagcgttaagaaggccaaggattctgcc
gctgttcttctgttggagcttcttaataaatggtatccacattcatga
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integrated database retrieval system
