KEGG   Nelumbo nucifera (sacred lotus): 104585821
Entry
104585821         CDS       T04131                                 
Name
(RefSeq) protein RTF1 homolog
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nnu03021]
    104585821
Transcription machinery [BR:nnu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     104585821
SSDB
Motif
Pfam: Plus-3 PBP1_TM
Other DBs
NCBI-GeneID: 104585821
NCBI-ProteinID: XP_010241126
UniProt: A0A1U7Z1T4
LinkDB
Position
Un
AA seq 666 aa
MADLENLLLEAAGRTGGPGRNRHSRPPPSRRRRDDSYFDDGSDSKDDDDSDDDDPGYSGR
KPSGSQVPLKKRLDAHDKDDDRDSRDDDRDYDDDDDDEDRRAGSGDDSDVGSDLYKDDRD
REELANMSELQREFILSERATKKDDKRLQEAVRARQGGKKTDIMKETPPSVRVRSSSRYA
DKLAAKDDALNELRNKRRNKQDPEGHRKLRDSGRGGLGARGGSPVRRRSILTAASPSSSS
QSDSQSGSHSRDDGSTGDGDLGDSDDDRHGAGKEVPTFEEIKSITIRRSKLAKWFMEPFF
EELIVGCFVRVGIGMSRSGQSIYRLCMVKNVDATDPNKQYKLENRTTYKYLNCIWGNESS
AARWQMARVSDSAPLVEEFNDWLREVERHGGRMPTKQDVSEKREAIQKTNTFVYSAATVK
QMLQEKKTASSRPLNIAAEKERLRREMEVAESRRDEAEVERIRARLQELEAMSRQAKEKD
SKAVRLAEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGEGA
PTANGEAAVASAVSVASSGTGARAAAEAGIAATAAALEAAAGAGKLVDTSAPVDQGTESN
SLHDFELPISLAGLQKFGGPQGAHLGFLGRKQRIEATVGCRVPENDGRRHSLTLTVSDYK
RRRGLL
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggcggacttagaaaatttgcttctggaagcggcaggaagaaccggtggaccagggagg
aacagacactcgcgccctccaccatcgagaaggcgaagggatgattcctatttcgacgac
ggcagcgattcgaaggacgatgacgattcggacgacgatgatccgggctactcaggtaga
aaaccctctggatctcaagtccctctcaagaagagactggacgcccacgacaaggacgat
gaccgcgatagccgagatgacgaccgcgattacgacgatgacgatgatgacgaagatcgc
cgtgccggcagcggggacgattctgatgtcgggagtgatctctacaaggacgacagggac
agggaagaactcgctaatatgagcgagttgcaacgagagttcatcctttctgaacgagcc
acgaagaaagatgataagaggttgcaggaggccgttagagcgaggcagggtggaaagaaa
actgatattatgaaagagacacccccttcggtccgtgttcggtcatcgtctaggtatgcc
gataagttggctgcgaaagatgatgctttgaatgagctgcggaataagaggaggaacaag
caggacccggagggtcaccgtaaattgagggattcgggaagagggggtttgggcgcgcga
ggtgggtctccggttcggcggagatcgatacttactgcggcgagtccgagtagttcgagt
cagagtgactctcagagtggaagtcacagcagagatgatggttcaacaggggatggggat
ctgggtgacagtgacgatgataggcatggagccgggaaggaggtgccgacgtttgaggaa
attaagagtattacgattaggaggtcaaagctggctaagtggttcatggaacccttcttt
gaagagctgattgtgggttgttttgtgagagttgggattggaatgtccaggtctgggcag
agtatatacagactttgtatggtgaaaaatgtcgatgccacggaccctaataaacagtat
aagcttgagaacaggactacatacaagtatttgaattgtatttggggcaatgagagctcg
gctgcgaggtggcagatggctagggtatctgactctgcaccactcgttgaagagttcaat
gattggttgcgtgaagtggagcgccatggggggcggatgcccactaaacaggatgtgtcg
gagaagagggaggctatccagaagaccaatacttttgtatactcggctgctaccgtgaag
cagatgctgcaagagaagaaaactgcctcgtcgaggcctttgaacattgcagctgagaaa
gagaggttgaggagggagatggaggtggcagagagccgaagagatgaggcagaggtggag
aggatacgagcgaggttgcaggaacttgaggcaatgtctaggcaggcgaaggagaaggac
tctaaggctgtaagattagcagagatgaacaaaagaaacagggctgagaatttcaagaat
gcatcagaattgaagccggttaacacaagtctgaaagcaggggaggcggggtatgatcca
ttttcaaggagatggacaaggtcaaggaattactatgtatcaaagcctggtgagggtgca
ccaacagcaaatggtgaagcagctgttgcttcagcagtgtcagtagccagcagtggtaca
ggagcgagagctgctgcagaggccggcattgctgcaacagctgctgctttggaagcagca
gctggtgctggaaagttggtggacacaagtgccccagttgatcaagggactgagtcaaat
tcgctgcatgactttgagcttccaatatcattggcaggactgcaaaagtttggaggaccc
cagggagcccatttgggattcttgggtaggaagcagaggatagaggcaacagttggatgt
cgtgtcccagaaaatgatgggaggcggcattctttgaccctgacagttagtgactacaag
cgacggagaggtctgctctga

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