Nelumbo nucifera (sacred lotus): 104585903
Help
Entry
104585903 CDS
T04131
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104585903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104585903
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104585903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
104585903
NCBI-ProteinID:
XP_010241246
UniProt:
A0A1U7Z3G5
LinkDB
All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MAYSFPEEVLEHVFSFIQDDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVSPRIVMRR
FPELRSVSLKGKPHFADFNLVPEGWGGYVYPWISAMAEAYPWLEELRLKRMVVTDEALEL
ISRSFKNFSVLVLSSCEGFTTDGLAAIAANCRNLRVLELWECEVDDRSGNWLSHFPESCT
SLVSLSFPCLDGEVSFSALERLVSRCTNLRTLRLNNSVPLDKLPNLLRRAPQLVDLGTGA
YTAELRPELYSKLGDAFAGCKGLKSLSGFWEAVPSYLPATYSICAGIRSLNLSYATIQSP
DLVKLIRQCPNLQRLWVLDYIEDCGLNALATTCKDLQELRVFPSDPFGVEANVSLTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALFTIARNRPNLTRFRLCIIEPRAPDYLTLQPLDAGF
GAIVENCKDLQRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCNSLR
KLEIRDCPFGDQALLANASKLETMRSLWMSSCSVSFEACKLLGQKMPSLNVEVIDERGSP
ESRPESLPIDKLYIYRTIAGPRCDMPSFVWNMGERSALRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctttccggaagaggtcttagagcatgttttctctttcattcaggacgat
aaggacaggaacgccgtttctctggtatgcaagtcttggtatgagatcgagaggtggtgc
cggcgtcggatcttcgtcgggaactgctacgcagttagccctaggattgtgatgagacgg
tttccggagctgcgatctgtgtcgttgaaggggaaaccacattttgctgattttaatctc
gtgccggagggatgggggggatatgtgtacccttggatctcggccatggcagaagcttat
ccgtggttggaggagctgaggttaaagcgcatggtggtgaccgacgaagcgttggagctg
atctcgcgttcgtttaagaattttagtgttttggttctctcgtcgtgcgaggggtttact
actgatggacttgccgccattgctgccaattgcaggaatctgagggtgctggagttgtgg
gaatgtgaagtggatgatcgtagtgggaattggctcagccatttccctgaatcatgcacg
tcactggtctctcttagtttcccatgtcttgatggggaggttagcttctccgccctggag
cgcctggtgagtaggtgcaccaacctgaggaccctcaggctcaacaattctgtgcctctt
gacaagctccctaacctccttcgccgagctcctcagcttgttgatctgggcaccggtgcc
tacactgcagaactccgtcctgaactctattcaaagcttggagatgcgtttgcaggctgc
aaggggcttaaaagcctatcagggttctgggaagcggtcccatcatatcttccagcgacc
tattctatctgtgctgggattagatctttgaacctgagttatgccaccatccaaagccct
gatctcgtcaagctcatcagacagtgtccaaatctgcaacgattgtgggtattggattac
attgaagactgtggactcaatgcccttgcaacaacttgcaaggaccttcaagagctgaga
gtgtttccatctgacccatttggtgtagaggctaatgtctctttgacagaacaaggcctt
gtctctgtttctgagggttgtcctaagctgcaatcagttctctatttctgccggcagatg
tcaaatgctgccttatttaccattgctaggaaccgccccaacttgactcgcttccgtctc
tgtatcatcgagccccgggcaccagattaccttactctgcaaccactagatgctggcttc
ggtgccattgttgagaactgcaaggacctccagcgcctttcactctctggtctccttact
gaccgtgtatttgagtacatcggaacacatgcaaagaagcttgagatgctctcaatagcc
tttgctggggatagcgatttgggcctccatcatgtcttgtcagggtgcaatagcctccga
aagctggagatccgggattgcccgtttggtgaccaagccctcctagctaatgcgtcaaag
ctggagacaatgcgatccctttggatgtcttcatgttcagtgagttttgaagcatgcaag
ttgctaggtcagaagatgccaagtctcaacgttgaggtcattgatgagaggggatcccca
gagtcgaggcctgaaagtttacctattgacaagctttatatttaccggacaattgcaggg
cctagatgtgatatgccaagctttgtttggaatatgggtgagaggtccgcattgaggttc
tcttga
DBGET
integrated database retrieval system
