Nelumbo nucifera (sacred lotus): 104586550
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Entry
104586550 CDS
T04131
Name
(RefSeq) uncharacterized LOC104586550
KO
K03504
DNA polymerase delta subunit 3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03410
Base excision repair
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
nnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104586550
03410 Base excision repair
104586550
03420 Nucleotide excision repair
104586550
03430 Mismatch repair
104586550
03440 Homologous recombination
104586550
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nnu01009
]
104586550
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnu03032
]
104586550
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104586550
Protein phosphatases and associated proteins [BR:
nnu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104586550
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104586550
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104586550
MMR (mismatch excision repair)
DNA polymerase delta complex
104586550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
MsyB
Motif
Other DBs
NCBI-GeneID:
104586550
NCBI-ProteinID:
XP_010242120
UniProt:
A0A1U7Z5M6
LinkDB
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Position
Un
AA seq
552 aa
AA seq
DB search
MVDVVNMGVLDEIQSLVSDKLQVVSYKWLSRNFSVSSNDAKRLLLEFIEKHGSGLEIIYT
LSGWLKKNPSVYNIRLVPGLKLAEIKQEFEENCSVQVYSVQACIPKDPAVLWNAEFVQAE
ELFNQPSAVNNCLRDNRFCGVSNSFVKRNAHETPAIVVPPQPRNVGVTGLSKSNSTNQTL
PAPFVQGKVQHESPKIGVQSSTAATKDVKSESSSKPVQASEPNIDKEKITTFPANKRKGQ
NDKRTGGSLATFWGRASAKLKPNCPPAETNSAAPNPVVTAEAQICAREAVDNFSSDEDEQ
DVKPRRISNGEGSRKRRVVFDFSDEEDDYENAVSLASPDPPPQRQSSIDDKHNNKTLVLE
KNNMNFEEKEEKSKIKQEKATKKDFILPQKEDTGVPNNGKKGGILLSEKIHNGFPESDGD
KKDTTNAAPMSPKRRKVLKTRIDERGREVTEVVWEGEETETKNADKDATKNSVNRAPAVK
SPALGGTAPSKPVDKTSASGAIAPSNSVAKSASGGSVTAPSNPASKAGNKKTGKAGVKDA
KQGNILSFFKRV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtcgtaaatatgggtgttctggacgaaatccaatctctcgtttctgataag
cttcaagtggtgtcttacaagtggcttagtcgcaacttctcagtgtcttcaaatgatgca
aagaggttgcttctggaattcattgaaaagcatggaagtggtttggaaataatatataca
ttgtctgggtggttaaagaaaaatccttcggtttacaatataaggcttgttcctggacta
aaacttgcagaaatcaaacaagaatttgaggaaaactgctcagttcaggtctacagtgtc
caagcttgcatcccaaaggacccagcagtgctttggaatgctgaatttgtacaagcagaa
gagctctttaatcagccttcagctgtgaataattgcttgagggacaacaggttctgtggg
gtttcaaattcctttgtcaagcgcaatgcccatgaaacacctgccattgttgtgcctcca
caacctagaaatgtgggagtcacagggctatcaaagagcaattctacaaatcaaactctt
cctgctccatttgtacaaggaaaagtacagcatgagagcccaaaaattggagtgcagtct
tctactgcagctacaaaggatgtcaagagtgaaagtagttccaagcctgttcaggccagt
gaacctaatatagataaagaaaaaattactacatttcctgctaacaaaaggaaaggccaa
aatgacaagcggactggaggatcactggccacattttgggggcgtgcatctgcaaagtta
aaaccaaactgcccaccagctgaaactaatagtgctgctccaaaccccgttgttaccgca
gaagctcaaatatgtgctcgtgaagcagtagataattttagcagtgacgaggatgagcaa
gatgtcaagcctaggagaatctcgaatggtgaaggcagtagaaagaggagggttgttttt
gatttctcagatgaagaggatgattatgaaaatgcagtcagtctagcctcacctgatcct
cctccacaaaggcaatcaagcatagatgataaacacaataacaaaaccttggttcttgag
aaaaacaatatgaattttgaagagaaagaagaaaaatcaaagattaagcaggagaaagca
accaaaaaagattttatcctaccacagaaagaagatacaggagttcctaacaatggaaag
aaaggtggaattttgttgtcagagaagatccacaatggtttccctgagagtgatggagat
aagaaagatacaactaatgctgctcctatgtcacccaaaaggaggaaagtgctcaagaca
cggattgatgagcgtgggagagaagttacagaggttgtttgggagggtgaagagacagag
accaagaatgctgacaaggatgcaaccaagaattctgtgaacagggctcctgcagtgaag
tctccagcattgggtggcactgctccatctaaaccagtggacaagacttcagcatcaggt
gccattgctccatctaattcagtggctaagtcagcatcaggtggcagtgtcactgctcca
tctaatccagctagcaaagctggaaacaagaaaacaggaaaagctggtgttaaggatgct
aagcaaggcaacattctgtcattcttcaagagggtttaa
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