KEGG   Nelumbo nucifera (sacred lotus): 104586550
Entry
104586550         CDS       T04131                                 
Name
(RefSeq) uncharacterized LOC104586550
  KO
K03504  DNA polymerase delta subunit 3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03030  DNA replication
nnu03410  Base excision repair
nnu03420  Nucleotide excision repair
nnu03430  Mismatch repair
nnu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104586550
   03410 Base excision repair
    104586550
   03420 Nucleotide excision repair
    104586550
   03430 Mismatch repair
    104586550
   03440 Homologous recombination
    104586550
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nnu01009]
    104586550
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nnu03032]
    104586550
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104586550
Protein phosphatases and associated proteins [BR:nnu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104586550
DNA replication proteins [BR:nnu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    104586550
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      104586550
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     104586550
SSDB
Motif
Pfam: CDC27 MsyB
Other DBs
NCBI-GeneID: 104586550
NCBI-ProteinID: XP_010242120
UniProt: A0A1U7Z5M6
LinkDB
Position
Un
AA seq 552 aa
MVDVVNMGVLDEIQSLVSDKLQVVSYKWLSRNFSVSSNDAKRLLLEFIEKHGSGLEIIYT
LSGWLKKNPSVYNIRLVPGLKLAEIKQEFEENCSVQVYSVQACIPKDPAVLWNAEFVQAE
ELFNQPSAVNNCLRDNRFCGVSNSFVKRNAHETPAIVVPPQPRNVGVTGLSKSNSTNQTL
PAPFVQGKVQHESPKIGVQSSTAATKDVKSESSSKPVQASEPNIDKEKITTFPANKRKGQ
NDKRTGGSLATFWGRASAKLKPNCPPAETNSAAPNPVVTAEAQICAREAVDNFSSDEDEQ
DVKPRRISNGEGSRKRRVVFDFSDEEDDYENAVSLASPDPPPQRQSSIDDKHNNKTLVLE
KNNMNFEEKEEKSKIKQEKATKKDFILPQKEDTGVPNNGKKGGILLSEKIHNGFPESDGD
KKDTTNAAPMSPKRRKVLKTRIDERGREVTEVVWEGEETETKNADKDATKNSVNRAPAVK
SPALGGTAPSKPVDKTSASGAIAPSNSVAKSASGGSVTAPSNPASKAGNKKTGKAGVKDA
KQGNILSFFKRV
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggtggacgtcgtaaatatgggtgttctggacgaaatccaatctctcgtttctgataag
cttcaagtggtgtcttacaagtggcttagtcgcaacttctcagtgtcttcaaatgatgca
aagaggttgcttctggaattcattgaaaagcatggaagtggtttggaaataatatataca
ttgtctgggtggttaaagaaaaatccttcggtttacaatataaggcttgttcctggacta
aaacttgcagaaatcaaacaagaatttgaggaaaactgctcagttcaggtctacagtgtc
caagcttgcatcccaaaggacccagcagtgctttggaatgctgaatttgtacaagcagaa
gagctctttaatcagccttcagctgtgaataattgcttgagggacaacaggttctgtggg
gtttcaaattcctttgtcaagcgcaatgcccatgaaacacctgccattgttgtgcctcca
caacctagaaatgtgggagtcacagggctatcaaagagcaattctacaaatcaaactctt
cctgctccatttgtacaaggaaaagtacagcatgagagcccaaaaattggagtgcagtct
tctactgcagctacaaaggatgtcaagagtgaaagtagttccaagcctgttcaggccagt
gaacctaatatagataaagaaaaaattactacatttcctgctaacaaaaggaaaggccaa
aatgacaagcggactggaggatcactggccacattttgggggcgtgcatctgcaaagtta
aaaccaaactgcccaccagctgaaactaatagtgctgctccaaaccccgttgttaccgca
gaagctcaaatatgtgctcgtgaagcagtagataattttagcagtgacgaggatgagcaa
gatgtcaagcctaggagaatctcgaatggtgaaggcagtagaaagaggagggttgttttt
gatttctcagatgaagaggatgattatgaaaatgcagtcagtctagcctcacctgatcct
cctccacaaaggcaatcaagcatagatgataaacacaataacaaaaccttggttcttgag
aaaaacaatatgaattttgaagagaaagaagaaaaatcaaagattaagcaggagaaagca
accaaaaaagattttatcctaccacagaaagaagatacaggagttcctaacaatggaaag
aaaggtggaattttgttgtcagagaagatccacaatggtttccctgagagtgatggagat
aagaaagatacaactaatgctgctcctatgtcacccaaaaggaggaaagtgctcaagaca
cggattgatgagcgtgggagagaagttacagaggttgtttgggagggtgaagagacagag
accaagaatgctgacaaggatgcaaccaagaattctgtgaacagggctcctgcagtgaag
tctccagcattgggtggcactgctccatctaaaccagtggacaagacttcagcatcaggt
gccattgctccatctaattcagtggctaagtcagcatcaggtggcagtgtcactgctcca
tctaatccagctagcaaagctggaaacaagaaaacaggaaaagctggtgttaaggatgct
aagcaaggcaacattctgtcattcttcaagagggtttaa

DBGET integrated database retrieval system