Nelumbo nucifera (sacred lotus): 104586625
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Entry
104586625 CDS
T04131
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
nnu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104586625
03083 Polycomb repressive complex
104586625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104586625
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104586625
Histone modification proteins
HAT complexes
HATB complex
104586625
HDAC complexes
Sin3A-HDAC complex
104586625
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104586625
PRC2.2
104586625
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104586625
Heterochromatin formation proteins
Other heterochromatin formation proteins
104586625
Chromatin remodeling factors
NuRD complex
104586625
NuRF complex
104586625
NuRF complex (fruit fly)
104586625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
eIF2A
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
104586625
NCBI-ProteinID:
XP_010242216
UniProt:
A0A1U7Z5V5
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MRERGKSGQPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVLANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIHDHITASAADTKSPGSGSSSIKSASKASAATDKATDSPSIGPR
GIYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGTSPAVKVEKAHNADLHCVDW
NPHDENLILTGSADNSVRMFDRRNLTSGGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSS
AEDGFLNIWDYEKVGKKDRVGARMPNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVSVSD
DCESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILSCSSKS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaggggaaaatcggggcagccatcggtggacgagaggtacacccaatggaag
tctctggttcccgtcctctacgactggctcgccaaccacaacctcgtctggccttctctc
tcatgccggtggggtccacaactagagcaggcaacttacaagaatcgccaacgtctctat
ctgtctgaacagactgatggtagtgttccaaacactcttgtattggcaaattgtgaagtt
gtaaaaccaagggttgctgcagcagagcacatatcgcagttcaatgaggaggcacgctct
ccttttgtaaagaagtttaaaaccattatacatcctggagaggtcaacagaatcagggag
ctgccacagaacagtaaaattgtggccacacatactgacagtcctgatgttctcatttgg
gatgtcgaggctcagcctaatcgtcatgctgtacttggagctgctgactctcgtccagat
ttgatattaactgggcatcaagataatgcagaatttgcgcttgccatgtgtccaacagaa
ccttttgttctatctggaggaaaagataaatcagttgttttatggagtattcatgatcat
ataactgcttcagcggcagacacaaaatcaccaggttctgggagctcaagcattaaaagt
gcgtcaaaggctagtgctgctactgacaaagctacagacagtccttctattggaccacgt
ggtatctatcaagggcatgaggatactgttgaagatgtgcagttctgtccttcaagtgca
caagaattttgtagcgtaggtgatgattcttgtcttatactatgggatgcacgaactggt
acgagtccagctgtcaaggttgagaaagctcataatgctgatttgcactgtgttgattgg
aatcctcatgatgaaaaccttattctaactgggtcggctgataattccgttcgcatgttt
gaccggcgaaacctgacttctggtggtgttggatcgcctatctataaatttgaaggtcac
aaagctgctgttctttgtgtgcagtggtctccggacaagtcatctgtctttggcagctct
gcagaggatggtttcttaaacatttgggattatgagaaggttggtaagaaggaccgtgtt
ggagcaagaatgccaaattctccaccaggcttatttttccaacacgcaggacacagggat
aaagttgttgattttcattggaatgcatctgatccgtggacaatagttagtgtatctgat
gattgtgaaagtactggtggaggtgggacactacagatatggcggatgagtgatctgatt
tacaggccagaagaagaggtcttggctgagctcgagaagttcaaatcacacatactcagt
tgttcatcaaaatcttga
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