Nelumbo nucifera (sacred lotus): 104587142
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Entry
104587142 CDS
T04131
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03020
RNA polymerase
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104587142 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
104587142 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104587142 (RPB2)
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104587142 (RPB2)
Enzymes [BR:
nnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104587142 (RPB2)
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104587142 (RPB2)
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104587142 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104587142
NCBI-ProteinID:
XP_010242918
UniProt:
A0A1U7YXW1
LinkDB
All DBs
Position
Un
AA seq
1189 aa
AA seq
DB search
MYGGDEYDPSMNDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
DIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
APLYVDVTKRVIKKGHDCEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMF
VRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMM
ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCE
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAY
VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN
PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTE
VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAK
GFIEYVDTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRE
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLR
HSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC
GYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR
GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKEVKPSKDQKKKGA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggagacgagtatgatccctcaatgaacgatgaggacgaagagatcactcag
gaagatgcctgggcggtgatcagtgcttacttcgaggagaaaggtctcgtgaggcaacag
ctcgattccttcgatgaattcatccagaacactatgcaagaaattgttgacgagtctgcc
gacatcgagatccgtcccgagtcacagcacaaccccggtcgccagtccgacttccttgag
actatatacaagattagctttggtcagatatacttgagtaagcccatgatgacggagtcg
gacggtgaaactgcaaccttgtttccaaaggcggcaaggctgaggaatctgacctactcg
gccccattgtatgtggatgtcaccaaaagagtaataaaaaaagggcatgattgtgaggaa
gtcactgagactcaggaattcgccaaggtcttcattgggaaggttcctataatgctccga
tcaagttactgcactctgtatcaaaattcagaaaaggatttaacagagcttggggagtgt
ccatatgatcaaggtggatacttcatcattaatggaagtgagaaagttctgattgctcag
gagaaaatgagcaccaaccatgtctacgtgtttaagaagaggcagcccaacaagtatgcc
tatgtggctgaagtccggtctatggcggaatcgcaaaacaggccacccagcagcatgttt
gttcggatgctttctcggacaagtgccaaagggggatcttcaggacaatatatacgtgct
actcttccatatatccggacggaaatccctataattattgtgtttagggctttaggattc
gttgctgacaaagatatactggagcacatatgctacgatttttctgatactcagatgatg
gaattgctacgcccttctctggaagaagcatttgtgattcagaatcaacaagttgcattg
gattacattgggaaaagaggatctactgtgggtgtgactagggaaaagaggataaagtat
gctaaagagattcttcaaaaagaaatgcttccacatgttggtgttggggaatattgtgaa
acaaagaaagcttactattttgggtatatcatccatcgtcttttgctttgtgctcttgga
cgaagagcagaagacgatagggatcactatggtaacaagagattggaccttgctggtccc
ttacttgggggcttgttccgaatgcttttcagaaagttgactagggatgtgagagcatat
gttcagaagtgtgtcgacaatggcaaggatgttaatttgcaatttgcaatcaaagcaaag
actatcactagtggtctgaagtactcccttgccactggaaactggggtcaggcaaatgca
gctggtacaagagctggagtttcacaggttttgaatcgcttgacgtatgcttctacactg
tctcacttgcgaaggctaaactctccaatagggcgcgaagggaaattggcaaagcccagg
cagttgcacaactcacattgggggatgatgtgccctgcagagacaccagaagggcaggct
tgtggactggtgaagaatctggcactgatggtgtacatcactgttggatccgcagcaaat
cctatcctggaatttttagaagagtggagtactgaaaattttgaggaaatatctcctgca
gttattcctcaagcaacaaaaatttttgtcaatggttgctgggttggcattcatcgtaat
cctgagcttttggtgaagacactgaggcagttaagacggcaggttgatgtcaacaccgaa
gttggagtcatccgagatatccgtttgaaagaattacgactttatactgactatggccgt
tgcagtcgtcctttgtttattgtggagaaacaaaggctgctgataaagaaaaaggacatt
cgtgctttgcagcaaagagaatcttctgaagagggtggatggcatgaccttgttgctaag
ggatttatagaatatgtagatacagaggaagaggaaacaacaatgatttccatgactatt
aatgatcttgtaactgcaaggcttaacccggaggaagcatattctgaaacttatacccat
tgtgaaatccatccatcattgatattgggtgtttgtgcttctattattccatttcctgac
cataaccagtctccacgtaatacgtaccaatcggcaatgggcaagcaggccatgggaatc
tatgtcacaaattaccaattacgaatggacactttggcgtatgtgctttactatccccag
aaacctcttgttacaactcgtgccatggaacacttgcactttaggcagttgcctgctggc
attaatgcaattgttgccattgcctgctattctgggtacaaccaagaggattctgttatt
atgaatcaatcttcaatagatcgtgggttcttcagatcattattcttccgttcatatagg
gatgaagagaagaagatgggaacacttgttaaagaggactttgggcgtccaagcagggaa
aataccatggggatgagacatgggtcttacgataaattggatgatgatggtcttgcacca
cctggcacaagggtctctggtgaggatgtcataattgggaagacaacacccattgctcag
gatgactctcaggggcagtcttcaaggtatacaaggcgtgatcacagtacaagccttcgt
cacagtgaaagtggaatggtagatcaggttttgttgactacaaatgctgatggcttaagg
tttgtgaaagtaaggatgagatcagttcggataccccagattggggacaagttcagcagt
aggcatggtcagaagggaactgttggcatgacatacacacaggaagatatgccatggact
gtggaaggcattacccctgatattattgtgaatccacatgctattccttctcgaatgaca
attggtcagcttattgagtgtatcatgggaaaggttgctgctcacatgggaaaagaggga
gatgctactccttttactgatgtcacagtggacaacatcagtaaagcccttcacaaatgt
gggtaccagatgcgtggttttgagaccatgtacaatggtcacacaggccggaagttgact
gctatgatattcctgggtcccacttactaccagaggttgaagcacatggtggatgataag
atccattcacgagggagggggccagtgcagattctcaccaggcagcctgctgaaggacgg
tctcgtgatggtggtctccgatttggggagatggaacgagattgtatgattgctcatggg
gctgcacactttctcaaagaacgattgtttgaccagagtgatgcctacagagttcatgta
tgtgagcgttgtgggctgattgccattgccaacctcaagaagaactcattcgagtgcaga
ggttgcaagaataagacggacattgttcaggtacatataccttatgcttgtaaactgctt
ttccaagagttgatgtctatggccattgcccctcggatgctgacaaaggaagtgaagcca
tccaaagatcaaaagaagaaaggagcttga
DBGET
integrated database retrieval system
