Nelumbo nucifera (sacred lotus): 104587248
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Entry
104587248 CDS
T04131
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu04120
Ubiquitin mediated proteolysis
nnu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104587248
04120 Ubiquitin mediated proteolysis
104587248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nnu04121
]
104587248
Enzymes [BR:
nnu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104587248
Ubiquitin system [BR:
nnu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104587248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_5
zf-HC5HC2H
zf_RING_Vps8
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104587248
NCBI-ProteinID:
XP_010243083
UniProt:
A0A1U7YS88
LinkDB
All DBs
Position
Un
AA seq
558 aa
AA seq
DB search
MMRLQTYAGLSLVGTLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL
IKRLFLGSLREAEVERLNEQSWREIMEILFVITIFRQDFSVMFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMGFLLILDSLFLYSYLKHLIQTWQASVSIFFSFEYM
ILATTIVSTFVKYIFYISDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFFLIFVNYG
VPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMI
TAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENVTTTAGGQQGIHTEVHQQETGA
AGTSSQGSADGVVDDNLRQHYARLQAATAAASIYEKSYVYPSSNAFAWYPGYSLLPLTCM
PSANSCTMDSTGDRTASGELQQQQFATPGGQLNFTYPQVPHYPFIPFQAISTNFTGQRLG
TDVNVEGCHLEARERFIQHQIEILQSQLQLLRQQKPGETMKMSSTASDSKGKTSASPSSS
SSISDCGCHGEVEEVEKQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacttatgccgggcttagtttagtgggcacacttgctataatttat
catgccttcagcagtagaggtcaattttacccagctatggtgtatctgtccacatccaag
atcagtttggtgcttcttttaaatatgggtctggtcatcatgtgcattttgtggcagtta
attaagcgcttgttccttgggtccctcagagaagcagaagttgagagattgaatgaacag
tcatggagggagatcatggaaatcctttttgtgattacaatattccgacaagatttctct
gttatgtttcttgcaatggtaactgctctcctgttaattaaagctttgcattggttggct
cagaagagggttgagtacattgagacgactccatctgttcccatgttgtctcatatccgg
attgtgtctttcatgggtttccttcttatcttggatagtctcttcttgtacagttatttg
aaacatttgatacagacatggcaggcttctgtttctattttcttttcatttgagtacatg
atactagctacaactatagtgtcaacatttgtaaaatatattttctatattagcgacatg
ctgatggaaggacaatgggagagaaaagcagtttacaccttttacttggagcttatacgt
gatttgcttcacttatctatgtacctatgcttcttctttctgatttttgtgaactatggt
gtgccattacatttgattcgagagctttatgagacttttcgtaacttcaaggtccgggtt
gctgattatattcggtaccggaaaattacttcaaacatgaatgaccgcttccctgatgca
acacctgaagaacttaatgcgagtgatgcaacctgcattatttgtcgtgaggagatgata
acagccaagaagctcatctgtggccacctttttcatgtgcattgccttcgatcatggttg
gagcggcaacagacttgcccaacatgcagagcattagttgttccacccgagaatgtgaca
accacagctggagggcaacagggaatacacactgaggttcatcaacaagaaacaggagct
gctggtacatcatctcagggttcagcagatggtgtagtggatgataacctgaggcagcat
tatgctagactccaagctgctactgcagctgcttcaatctatgagaaatcttatgtatat
ccttcttcaaatgcttttgcttggtaccctggatattctttacttcccctgacgtgtatg
ccttcggcaaactcctgtaccatggactcaactggagatagaactgcttctggggaactg
caacaacaacaatttgcaacccctggtggacagttaaatttcacatatcctcaggttcca
cactacccattcatccctttccaggcgattagtactaattttacagggcagagactggga
actgatgtaaatgtagaaggttgtcatctggaagctagagaaagatttattcagcaccag
attgagattctgcaaagccagctgcagcttttacgacaacagaaaccaggggaaaccatg
aaaatgagttccactgcttcagatagtaagggtaagaccagtgcatctccatcctcatct
tcgtccatttcagactgtggctgtcatggtgaggttgaagaggtggagaaacaatga
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integrated database retrieval system
