Nelumbo nucifera (sacred lotus): 104587551
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Entry
104587551 CDS
T04131
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03410
Base excision repair
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104587551
03410 Base excision repair
104587551
03420 Nucleotide excision repair
104587551
03430 Mismatch repair
104587551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnu03032
]
104587551
03036 Chromosome and associated proteins [BR:
nnu03036
]
104587551
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104587551
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104587551
DNA Replication Termination Factors
ELG1-RFC complex
104587551
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104587551
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104587551
Check point factors
HRAD17(Rad24)-RFC complex
104587551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_assoc_2
AAA_16
AAA_14
DUF815
AAA_5
nSTAND_NTPase5
RuvB_N
AAA_24
AAA_30
AAA_7
ATPase_2
bpMoxR
AAA_19
ResIII
DNAX_ATPase_lid
AAA_3
nSTAND3
TIP49
SLFN-g3_helicase
AAA_28
AAA_2
nSTAND6
DUF3086
Mg_chelatase
AAA_25
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
104587551
NCBI-ProteinID:
XP_010243510
UniProt:
A0A1U7Z8V6
LinkDB
All DBs
Position
Un
AA seq
358 aa
AA seq
DB search
MAETASPMEIDGADNRAKSNKGKNVIAVPTDGKATPWVEKYRPQSLADVAAHRDIVDTID
RLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGTQFHNMILELNASDDRGIDVVRQQIQ
DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKIIP
ALQSRCTRFRFAPLDASHVMDRLKYVIEAEGLDVSEGGLAALVRLSSGDMRKALNILQST
HMASQHITEEAVYLCTGNPMPKDIEQISFWLLNESFATSYRCISEMKMKKGLALVDIVRE
VTMFIFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVAAAK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgcctcgccgatggaaatcgacggtgccgataaccgggcgaagtccaac
aagggaaaaaacgtcatcgccgtcccgacggacggcaaggcgacgccttgggtcgagaag
taccggccgcaatccctagccgatgtggcagctcacagagacatcgtcgacacgattgat
aggcttacaaacgagaacaaactgccacatctcctcctctacgggcctcccggaaccggc
aagacttcgaccattcttgctgtcgctcgcaagctctatggaactcagttccataacatg
atcttagagttgaacgcgtccgatgataggggcattgatgtcgtgcggcagcagattcaa
gacttcgcaagcacccaaagtttctcctttggtgcaaaatcatctgtgaaattggtccta
ttggatgaggctgatgccatgacaaaagacgcacaatttgccttgcgcagagtgattgag
aaatacacaaagaataccagatttacacttatctgtaatcatgtcaacaaaattattccg
gcattgcagtcaagatgtactcgatttcgcttcgcccctcttgatgcttctcatgtcatg
gatcgtcttaaatatgtgatagaggctgaagggcttgatgtatctgagggcggcttagca
gcactagtacggctaagcagtggtgacatgcgaaaagctttgaacattttacagtcgacg
catatggcttctcagcatataactgaagaggctgtctacctatgtaccggaaatccaatg
cccaaagacatcgagcagatatctttttggcttctcaatgaatcatttgcaactagttac
agatgtatctctgagatgaagatgaagaaaggattagcattggtagacattgtgagagag
gttaccatgttcatctttaagatcaaaatgccatccgatgttcgtgtgcagttgattaat
gatttggctgacatagagtataggttgagttttgggtgcaatgataaattgcaacttgga
tcactaatagcctcttttaccagggctcgatctgctctggttgctgctgcaaagtag
DBGET
integrated database retrieval system
