Nelumbo nucifera (sacred lotus): 104587558
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Entry
104587558 CDS
T04131
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03013
Nucleocytoplasmic transport
nnu03015
mRNA surveillance pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104587558
09122 Translation
03013 Nucleocytoplasmic transport
104587558
03015 mRNA surveillance pathway
104587558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104587558
03041 Spliceosome [BR:
nnu03041
]
104587558
03009 Ribosome biogenesis [BR:
nnu03009
]
104587558
03012 Translation factors [BR:
nnu03012
]
104587558
Enzymes [BR:
nnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104587558
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104587558
mRNA cycle factors
Stress granule specific factors
104587558
Spliceosome [BR:
nnu03041
]
Complex C
Other components
EJC/TREX
104587558
Ribosome biogenesis [BR:
nnu03009
]
Eukaryotic type
90S particles
Helicases
104587558
Translation factors [BR:
nnu03012
]
Eukaryotic type
Initiation factors
eIF-4
104587558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104587558
NCBI-ProteinID:
XP_010243520
UniProt:
A0A1U7YZA1
LinkDB
All DBs
Position
Un
AA seq
410 aa
AA seq
DB search
MAAATVVPANRTGRRSGPGPSDDNIEFETSAGVEAITSFDQMGIRDDLLRGIYAYGFEKP
SAIQQRAVLPIIKGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELAAQ
TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAI
KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN
FTVSSMHGDMPQKERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
IHRIGRSGRFGRKGVAINFVRNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccacagtggtgcctgcgaacaggacgggccggagaagtgggccaggaccc
agcgacgataacatagaatttgaaacgagtgcaggcgtggaagcaatcacgtcgttcgat
cagatgggcatcagagacgatcttttgagaggaatatatgcttacgggtttgagaaacca
tcggctatacagcagagagcagtgctacccatcatcaagggtcgtgatgtcatcgctcag
gcacagtctggtacggggaagacctccatgattgccctcactgtctgccaaatggtcgat
acctccagccgagaggtccaagcattgatcctgtcacctaccagggaacttgctgcacag
actgagaaagtaattttggcaattggtgattacataaatatacaggctcatgcatgcatt
ggaggcaaaagcgtgggtgaggacataaggaaactggagtatggagtccatgtagtgtct
ggaacacctggcagggtttgtgacatgataaagagaagaacattacgcacaagagctatc
aagctattagtccttgatgaatctgatgaaatgttgagtagagggtttaaggatcaaatt
tatgatgtgtacagatatcttccgccagagcttcaggttgtgttgatttctgcaaccctt
cctcatgagatattggaaatgacaaacaagttcatgactgatcctgttaggatccttgtg
aagcgtgatgaattgactttggagggtatcaaacagttctttgttgctgttgaaagagag
gagtggaaatttgatactttgtgtgatctctatgatacacttacaatcactcaagctgtt
attttttgcaacaccaagcgaaaggttgattggctaactgagaagatgcggagcaataac
ttcacagtctcctcaatgcatggtgacatgccccagaaggaacgtgatgctataatgtca
gagttcaggtcaggaacgacccgtgttctcatcacaacagatgtatgggctcgggggctt
gatgttcaacaggtgtctctggttatcaattatgacctaccaaataaccgtgagctttac
attcatcgtataggacgctctggtcgttttggccgtaagggagttgcaatcaactttgta
cgcaatgatgacattaggattctaagagacatagagcagtattacagtacacagattgat
gagatgccaatgaatgtggccgatctaatttga
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integrated database retrieval system
