KEGG   Nelumbo nucifera (sacred lotus): 104587598
Entry
104587598         CDS       T04131                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104587598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nnu03041]
    104587598
Spliceosome [BR:nnu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104587598
 Complex B
    104587598
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 104587598
NCBI-ProteinID: XP_010243574
UniProt: A0A1U7YTC6
LinkDB
Position
Un
AA seq 323 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQAIDPRRIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKMISREL
RRKLFGRYRRRHSRSRSRSPNKHRNYEERSHGGRGFGRRHDNRDHHYPDNRGRRPRSRSP
GWKRGRSRSPGGRRNRSPVREGSAERRAKIEQWNREREQAEAGNKDNIESAPNNNESNGY
DENGGEYYNEQQQQPPQQGTYHY
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcggaacacttggcgtcgatcttcggaacggagaaagatagggtgaattgccccttt
tacttcaaaatcggcgcttgcagacatggcgatcggtgttcgagacttcacacgaagccg
agtataagccctactttgctgctttcgaacatgtaccagaggcctgatatgattactccc
ggagtggatccccagggccaggccattgatcctcgcaggatccaggagcayttcgaggat
ttctatgaggatctatttgaggagctgagcaagtacggtgagattgaaagcctgaatatc
tgtgacaatttggctgatcacatggtgggtaatgtctacgttcaatttagagaggaagag
catgccgccaatgcacttcgcaaccttaccgggaggttctatgcagggcgtccaattatt
gttgatttttccccagtcacagatttccgtgaagccacatgtaggcaatacgaggaaaat
acttgcaatcgaggtggctattgcaacttcatgcatttgaaaatgattagcagggaactg
aggcggaagttgtttgggaggtataggcgaaggcacagtcgcagtagaagccgaagtccc
aacaaacatcggaattatgaggagcgttcacatggtggtcgtggttttggcaggcggcat
gacaaccgggatcaccattaccctgataatagaggtaggaggcctaggagccgaagcccc
ggatggaagaggggaagaagcaggagccctgggggtaggagaaataggagcccagttagg
gaaggtagtgctgagagaagggctaaaattgagcagtggaacagggaaagagaacaagct
gaagctggtaacaaggataacattgaaagtgctcccaacaacaatgaaagtaatggatat
gatgaaaatggaggggagtactacaatgagcagcagcaacagccaccgcagcaaggaaca
tatcactactga

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