KEGG   Nelumbo nucifera (sacred lotus): 104587863
Entry
104587863         CDS       T04131                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104587863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104587863
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104587863
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     104587863
SSDB
Motif
Pfam: TFIIA HTH_ParB_Mtase
Other DBs
NCBI-GeneID: 104587863
NCBI-ProteinID: XP_010243918
UniProt: A0A1U7Z9V6
LinkDB
Position
Un
AA seq 825 aa
MDGFDDEGGIEKIPNQKAFKGLAESSSEDARFDASQYAFFDKDVMEEVELGGLEDEDDDV
PLIGFDDDEYPLSDREELRGENLGSLSDIDDLVSTFSKLNKAVSEPRTAGVIGDRGSFSR
ESSSTTEWAQESDFPNWLDPHIFDSENVREGKRWSSQPHPSARLGDSKPLYRTSSYPQQP
QQQQHFSEPVLIPKSSFTSYPPPGGRSQASNQHSHQLNMPSLGGSPLPFSSPNLSPFSNS
QLHLQGLSHGLHYGGNLTQFASQGLSMNNRPQGHWGNQANLFSGDHSNLLNNLLQQQLPH
PSGLVPQQLMSQQQQQQQQRLHHPVQPSLAHFSALQSQLFGSHSSPSPHVISKYESMLGM
AELRDQRTKATQRGRQNLRYSQQGSDTSSQKSDNGWPQFRSKYMTAEEIESILRMQHAAT
HSSDPYVDDYYHQACLAKKSAGSRLKHHFCPTHLRDLPSRARANTEPHAFLQVDALGRLP
FSSIRRPRPLLEVEPPFSAADGSIEQNVSEKPLEQEPMLAARITIEDGLCLLLDVDDIDR
LLQFGQPQDGGIQLRRCRQVLLEGLAASLQLVDPLGKGGRTVGLAPKDDLVFLRLVSLSK
GRKLLSKYLQLLYPGGELTRIVCMAIFRHLRFLFGGLPSDLSAAETTTNLANTVSACVRD
MDLGALSACLAAVVCSSEQPPLRPLGSTAGDGASVILKAILERATELLTNPQAASNYSMQ
NRALWQASFDAFFTLLTKYCLSKYDSILQSLLMQAPPNTASIGSEAARAISREMPIELLR
SSLPHTNEHQRKILLDFAQRSMPVTGFNAHGSGSGSQINSESVPG
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggatggattcgatgatgagggtggcattgaaaagatccccaaccagaaggctttcaag
ggattagcagagagttcatcagaagatgcacgctttgatgcatcacaatatgcattcttt
gataaggatgttatggaggaggttgaactaggtggattagaagatgaagatgatgatgtt
ccattaattgggtttgatgatgacgagtatccgttgtctgatagagaagagttgcggggt
gaaaacttaggatcattatctgatattgatgatcttgtgagcactttttcaaagttgaat
aaagctgttagtgaacccagaactgctggagttattggcgataggggatcattctctagg
gaaagttcatccactacagagtgggcacaagagtcagattttcccaactggttagatcca
catatttttgattcagaaaatgttcgggaaggtaaaagatggtcatcgcagccacatcct
tctgctcgtcttggagactcaaaaccattgtacagaacatcttcatatcctcagcagcca
caacagcagcagcactttagtgaaccagttttaatacccaagtcttcttttacttcgtac
ccccctcctggtggtcgatctcaggcatcaaatcagcattctcaccaactcaacatgcca
tctcttggtggatctccgctacccttctcttcaccaaacctgtctccgttctctaattct
cagcttcatttgcaaggcctatctcatggattacattatggtggaaacctaacccaattt
gcctcccaaggtctctccatgaataatcggccacagggtcactgggggaaccaggccaac
ctattttctggagatcattccaatcttttgaacaacttgttacaacagcaattgcctcat
ccaagtgggttagtcccccagcagttgatgtctcagcagcagcagcagcaacaacagaga
ctgcatcatccagttcaaccatctcttgcccatttttcagctctccagtcccaattattt
ggtagccattcttctccatcaccacatgtaataagcaagtatgaatcaatgctggggatg
gctgaattaagagaccaaaggacaaaagcgacacaaaggggtaggcagaacctgcgctat
tctcaacaaggctctgatacaagtagccaaaagagtgataacgggtggccacagttcaga
tccaagtacatgactgctgaagaaatagaaagtattcttagaatgcagcatgctgcaaca
cacagtagtgatccttatgtagatgactattaccaccaggcttgtcttgcaaaaaagtct
gcagggtcaaggttgaaacaccatttctgcccgactcacctgagggacctgccttcccga
gcacgtgcgaacactgagcctcatgcctttctccaggttgatgctttgggaagactaccc
ttttcttctatacgccggcctcgccctctccttgaagttgaacctccattctctgctgct
gatggtagcattgagcaaaatgtttctgagaagcctcttgaacaagagccaatgcttgca
gcacgaattactatagaagatggcctgtgtcttcttcttgatgtggatgacattgacagg
ctcttacaattcggtcagccccaagatggtgggatacaactgagacgttgccgtcaggtc
ctgttagaggggcttgcagcatcgcttcagctagttgatccgcttggaaaaggtgggcgc
acagtaggactggctcccaaagatgaccttgtgtttttacgactggtctctctttccaag
ggtcggaagctcctctcaaagtacttacagctcctctatcctggtggtgagcttacacgc
attgtctgcatggcaatttttcgtcacctcaggtttttgtttggtggcctcccctctgat
ctgagtgctgcagaaacaacaacaaatcttgcgaatactgtttctgcatgtgtgcgtgat
atggatcttggtgcacttagtgcttgtcttgctgccgtggtttgctcctcagagcagcct
ccactccggccgcttggaagcactgctggagatggggcttctgtcatcttaaaagccatc
cttgagagggcaactgaactattgacaaatcctcaggctgccagcaactacagcatgcag
aaccgggccctttggcaggcatcttttgacgcgttttttactctactcacaaagtattgt
ttaagcaagtatgacagtattttgcaatcattgctcatgcaagccccgccgaatacagca
tctattgggtcagaggctgcaagagctataagcagagagatgccgattgagctgctacgt
tcaagtcttcctcacaccaatgagcatcagaggaagatattactggattttgcacagcgc
tccatgcctgttaccggatttaatgcccatggcagtggtagtggaagtcaaattaattct
gaatcagttcctggttag

DBGET integrated database retrieval system